Strain Fitness in Shewanella oneidensis MR-1 around SO2383

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
2,484,386	-				+0.0
2,484,424	+				+0.3
2,484,460	+				-0.8
2,484,486	+				-0.1
2,484,548	-		SO2381	0.21	+0.5
2,484,775	+				+3.1
2,484,782	-				+1.5
2,484,803	-				-1.0
2,484,874	-				-1.2
2,484,880	+				+0.3
2,484,891	-				-0.2
2,484,902	+				-0.5
2,485,056	+		SO2383	0.15	+0.6
2,485,064	-		SO2383	0.16	+0.3
2,485,066	+		SO2383	0.17	+0.4
2,485,074	-		SO2383	0.18	+1.0
2,485,074	-		SO2383	0.18	+1.9
2,485,088	-		SO2383	0.21	-0.8
2,485,155	-		SO2383	0.34	-0.5
2,485,176	+		SO2383	0.38	-0.7
2,485,176	+		SO2383	0.38	-0.4
2,485,227	+		SO2383	0.49	+0.3
2,485,291	+		SO2383	0.61	+0.5
2,485,297	-		SO2383	0.62	+2.1
2,485,299	-		SO2383	0.63	+0.0
2,485,301	+		SO2383	0.63	+1.5
2,485,308	+		SO2383	0.65	+0.4
2,485,309	-		SO2383	0.65	-0.5
2,485,316	-		SO2383	0.66	+0.2
2,485,316	-		SO2383	0.66	+0.1
2,485,316	-		SO2383	0.66	-0.4
2,485,336	+		SO2383	0.70	+0.1
2,485,336	-		SO2383	0.70	+0.3
2,485,343	+		SO2383	0.72	+0.3
2,485,350	+		SO2383	0.73	-0.9
2,485,351	+		SO2383	0.73	+1.0
2,485,351	-		SO2383	0.73	-0.1
2,485,351	-		SO2383	0.73	+2.3
2,485,351	-		SO2383	0.73	+1.0
2,485,359	+		SO2383	0.75	+0.5
2,485,367	-		SO2383	0.76	-0.1
2,485,446	+				-0.1
2,485,446	+				+0.1
2,485,637	-				+0.5
2,485,812	+				+0.1
2,485,871	+				-0.3
2,485,874	-				-0.2
2,485,904	+				+0.2
2,485,907	-				-0.6
2,486,098	-				+1.1
2,486,114	+				-0.6
2,486,291	+		SO2384	0.21	+0.7
2,486,291	+		SO2384	0.21	+0.8
2,486,299	-		SO2384	0.22	+0.3
2,486,299	-		SO2384	0.22	-0.5
2,486,299	-		SO2384	0.22	-0.5
2,486,304	-		SO2384	0.22	-0.1
2,486,310	-		SO2384	0.23	-2.3
2,486,318	-		SO2384	0.23	+0.9
2,486,333	+		SO2384	0.25	+0.0
2,486,418	+		SO2384	0.32	+0.9
2,486,470	+		SO2384	0.37	+0.5
2,486,480	+		SO2384	0.38	+1.0