Strain Fitness in Shewanella oneidensis MR-1 around SO1878

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
1,972,943	+		SO1876	0.53	+0.5
1,972,944	+		SO1876	0.53	+0.3
1,972,944	+		SO1876	0.53	-0.6
1,972,944	+		SO1876	0.53	+0.2
1,972,944	+		SO1876	0.53	+0.1
1,972,944	+		SO1876	0.53	+0.2
1,972,950	+		SO1876	0.54	-0.2
1,972,956	+		SO1876	0.55	+0.2
1,972,956	+		SO1876	0.55	+0.7
1,972,956	+		SO1876	0.55	+0.1
1,972,963	+		SO1876	0.56	-0.5
1,972,964	-		SO1876	0.56	-1.6
1,972,964	-		SO1876	0.56	+0.8
1,972,964	-		SO1876	0.56	-1.7
1,972,971	+		SO1876	0.57	+0.0
1,973,012	+		SO1876	0.63	-0.4
1,973,041	+		SO1876	0.67	+0.0
1,973,042	-		SO1876	0.67	+0.4
1,973,042	-		SO1876	0.67	-0.2
1,973,106	+		SO1876	0.77	+1.2
1,973,122	-		SO1876	0.79	-0.2
1,973,123	-		SO1876	0.79	+0.4
1,973,123	-		SO1876	0.79	+1.6
1,973,125	+		SO1876	0.79	+0.1
1,973,125	+		SO1876	0.79	-0.5
1,973,196	+		SO1876	0.90	+0.1
1,973,203	+				+0.7
1,973,205	+				-0.6
1,973,255	+				+0.4
1,973,273	+				+0.1
1,973,359	+				+0.1
1,973,359	+				+0.3
1,973,359	+				-0.2
1,973,367	-				-0.4
1,973,472	-				-0.4
1,973,511	+	bcp	SO1877	0.15	-0.5
1,973,613	-	bcp	SO1877	0.36	-0.3
1,973,647	-	bcp	SO1877	0.44	-0.3
1,973,698	-	bcp	SO1877	0.54	+0.1
1,973,726	-	bcp	SO1877	0.60	+0.1
1,973,760	+	bcp	SO1877	0.68	-0.2
1,973,760	+	bcp	SO1877	0.68	+1.8
1,973,760	+	bcp	SO1877	0.68	-0.6
1,973,760	+	bcp	SO1877	0.68	+2.9
1,973,760	+	bcp	SO1877	0.68	+0.3
1,973,760	+	bcp	SO1877	0.68	-0.6
1,973,760	+	bcp	SO1877	0.68	+0.8
1,973,760	+	bcp	SO1877	0.68	+0.3
1,973,760	+	bcp	SO1877	0.68	+0.4
1,973,765	+	bcp	SO1877	0.69	-0.2
1,973,768	-	bcp	SO1877	0.69	-1.8
1,973,768	-	bcp	SO1877	0.69	-0.7
1,973,768	-	bcp	SO1877	0.69	+0.3
1,973,768	-	bcp	SO1877	0.69	+0.4
1,973,768	-	bcp	SO1877	0.69	+0.2
1,973,768	-	bcp	SO1877	0.69	-1.0
1,973,768	-	bcp	SO1877	0.69	-0.0
1,973,768	-	bcp	SO1877	0.69	+0.2
1,973,768	-	bcp	SO1877	0.69	-0.4
1,973,805	+	bcp	SO1877	0.77	+0.1
1,973,814	-	bcp	SO1877	0.79	-0.6
1,973,897	+				+0.3
1,973,970	-				+0.8
1,974,116	-		SO1878	0.36	-2.2
1,974,130	+		SO1878	0.39	-3.8
1,974,140	+		SO1878	0.41	-1.7
1,974,148	-		SO1878	0.42	-1.9
1,974,313	+		SO1878	0.72	-1.4
1,974,437	-				-1.0
1,974,445	+				+0.0
1,974,553	-				+0.2
1,974,579	-				+1.1