Strain Fitness in Shewanella oneidensis MR-1 around SO1853

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
1,942,395	+		SO1851	0.71	+0.3
1,942,437	+		SO1851	0.73	-0.8
1,942,448	+		SO1851	0.74	-0.9
1,942,538	-		SO1851	0.78	-0.3
1,942,540	+		SO1851	0.78	+0.3
1,942,548	-		SO1851	0.78	-0.4
1,942,569	-		SO1851	0.79	-1.5
1,942,569	-		SO1851	0.79	-0.1
1,942,569	-		SO1851	0.79	+2.2
1,942,685	-		SO1851	0.85	-0.4
1,942,775	+		SO1851	0.89	-0.6
1,942,835	-				-0.5
1,942,871	+				-0.1
1,942,915	+				+0.0
1,943,022	+		SO1852	0.11	-0.8
1,943,022	+		SO1852	0.11	-0.5
1,943,022	+		SO1852	0.11	-1.9
1,943,085	-		SO1852	0.37	-2.0
1,943,138	-		SO1852	0.59	-1.4
1,943,140	+		SO1852	0.59	-1.9
1,943,148	-		SO1852	0.63	-0.5
1,943,279	+				-1.2
1,943,341	-				-0.3
1,943,348	+				-0.2
1,943,538	-		SO1853	0.15	+0.9
1,943,538	-		SO1853	0.15	+0.6
1,943,538	-		SO1853	0.15	-0.5
1,943,626	+		SO1853	0.20	+0.4
1,943,636	+		SO1853	0.21	+0.2
1,943,705	+		SO1853	0.24	-0.8
1,943,821	+		SO1853	0.30	+1.3
1,943,882	+		SO1853	0.33	+1.0
1,943,937	+		SO1853	0.36	+0.1
1,944,075	-		SO1853	0.43	-0.2
1,944,075	-		SO1853	0.43	-2.0
1,944,158	-		SO1853	0.48	+0.3
1,944,158	-		SO1853	0.48	-0.7
1,944,276	-		SO1853	0.54	-1.4
1,944,276	-		SO1853	0.54	-0.3
1,944,353	+		SO1853	0.58	+0.7
1,944,453	-		SO1853	0.63	-0.1
1,944,468	+		SO1853	0.64	-0.5
1,944,502	+		SO1853	0.66	-1.2
1,944,738	-		SO1853	0.78	-1.0
1,944,782	+		SO1853	0.80	+0.2
1,944,796	+		SO1853	0.81	+0.5
1,944,796	+		SO1853	0.81	+1.0
1,944,838	+		SO1853	0.83	-0.5
1,944,845	+		SO1853	0.83	-1.4
1,944,911	+		SO1853	0.87	+2.2
1,944,990	-				-2.3
1,945,030	+				+0.0
1,945,067	+				+0.3
1,945,067	+				-0.2
1,945,134	-				-3.0
1,945,206	+				-2.0
1,945,218	+				-1.7
1,945,229	+				-1.5
1,945,246	+				-2.6
1,945,322	+				-3.0
1,945,330	-				-1.2
1,945,533	-		SO1854	0.19	-2.0
1,945,794	+		SO1854	0.33	-1.0
1,946,085	-		SO1854	0.49	-1.4
1,946,148	-		SO1854	0.52	-2.3