Strain Fitness in Shewanella oneidensis MR-1 around SO1784
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
1,869,063 | - | mtrD | SO1782 | 0.88 | +0.8 |
1,869,127 | + | +1.2 | |||
1,869,133 | + | +0.4 | |||
1,869,141 | - | +1.6 | |||
1,869,368 | - | +1.0 | |||
1,869,405 | + | -0.3 | |||
1,869,405 | + | -1.0 | |||
1,869,424 | + | +0.4 | |||
1,869,426 | + | +2.4 | |||
1,869,426 | + | +0.5 | |||
1,869,510 | + | -0.2 | |||
1,869,587 | + | -1.5 | |||
1,869,597 | - | +0.4 | |||
1,869,860 | + | -2.0 | |||
1,872,125 | + | -4.1 | |||
1,872,252 | + | -0.4 | |||
1,872,252 | + | +0.2 | |||
1,872,252 | + | -0.7 | |||
1,872,260 | - | +0.3 | |||
1,872,260 | - | -0.5 |
Or see this region's nucleotide sequence