Strain Fitness in Shewanella oneidensis MR-1 around SO1363

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
1,417,304	+	tyrA	SO1362	0.41	-0.2
1,417,488	-	tyrA	SO1362	0.57	+0.1
1,417,488	-	tyrA	SO1362	0.57	+1.0
1,417,488	-	tyrA	SO1362	0.57	+0.1
1,417,628	+	tyrA	SO1362	0.69	-0.5
1,417,641	+	tyrA	SO1362	0.71	+0.4
1,417,641	+	tyrA	SO1362	0.71	+0.1
1,417,753	+	tyrA	SO1362	0.80	-0.1
1,417,829	+	tyrA	SO1362	0.87	+0.0
1,418,057	-				+0.0
1,418,128	+				+1.0
1,418,204	-				-0.4
1,418,241	+				-0.7
1,418,291	+				+0.6
1,418,465	+	hcp	SO1363	0.16	+0.3
1,418,465	+	hcp	SO1363	0.16	+0.0
1,418,465	+	hcp	SO1363	0.16	-0.3
1,418,597	+	hcp	SO1363	0.24	-0.9
1,418,664	+	hcp	SO1363	0.28	+0.2
1,418,899	+	hcp	SO1363	0.42	-0.2
1,418,907	-	hcp	SO1363	0.43	-0.1
1,418,958	+	hcp	SO1363	0.46	+0.4
1,418,966	-	hcp	SO1363	0.46	+0.4
1,419,074	+	hcp	SO1363	0.53	+0.2
1,419,092	-	hcp	SO1363	0.54	+0.8
1,419,211	-	hcp	SO1363	0.61	+0.1
1,419,213	+	hcp	SO1363	0.61	+0.0
1,419,214	+	hcp	SO1363	0.61	-0.2
1,419,222	-	hcp	SO1363	0.62	+0.1
1,419,226	-	hcp	SO1363	0.62	-0.5
1,419,226	-	hcp	SO1363	0.62	+0.3
1,419,236	+	hcp	SO1363	0.63	+0.6
1,419,394	-	hcp	SO1363	0.72	+0.2
1,419,571	+	hcp	SO1363	0.83	+0.7
1,419,571	+	hcp	SO1363	0.83	+0.8
1,419,571	+	hcp	SO1363	0.83	+1.3
1,419,662	-	hcp	SO1363	0.88	+0.8
1,419,662	-	hcp	SO1363	0.88	-0.1
1,419,762	+				+0.9
1,419,868	+				+0.3
1,419,911	-				-0.0
1,420,001	+				+0.1
1,420,001	+				-0.5
1,420,145	+				-0.5
1,420,174	+		SO1364	0.10	+0.5
1,420,174	+		SO1364	0.10	-0.2
1,420,174	+		SO1364	0.10	+0.8
1,420,190	-		SO1364	0.12	+0.3
1,420,251	-		SO1364	0.18	-0.4
1,420,295	-		SO1364	0.23	+0.1
1,420,374	+		SO1364	0.31	-0.5
1,420,374	+		SO1364	0.31	+1.1
1,420,382	-		SO1364	0.32	+0.3
1,420,382	-		SO1364	0.32	+0.3
1,420,503	-		SO1364	0.44	+0.2
1,420,632	+		SO1364	0.57	-1.0
1,420,680	+		SO1364	0.62	-0.5
1,420,696	+		SO1364	0.64	-0.3
1,420,743	+		SO1364	0.69	+0.6
1,420,743	+		SO1364	0.69	+1.1
1,420,788	+		SO1364	0.73	+0.9
1,420,802	-		SO1364	0.75	-0.1
1,420,825	+		SO1364	0.77	-0.0
1,420,833	-		SO1364	0.78	+0.7