Strain Fitness in Shewanella oneidensis MR-1 around SO1279

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
1,330,189	-		SO1278	0.56	+0.8
1,330,213	+		SO1278	0.58	+0.4
1,330,231	+		SO1278	0.58	-1.0
1,330,545	+		SO1278	0.73	+0.7
1,330,716	+		SO1278	0.81	-0.6
1,330,723	+		SO1278	0.82	+0.1
1,330,726	-		SO1278	0.82	+0.4
1,330,730	+		SO1278	0.82	-0.3
1,330,785	-		SO1278	0.84	-0.4
1,330,807	-		SO1278	0.86	-0.2
1,330,879	-		SO1278	0.89	-0.0
1,330,905	-				-0.0
1,330,974	+				+0.7
1,331,023	-				+0.4
1,331,042	+				-0.6
1,331,050	-				+0.3
1,331,065	-				+0.1
1,331,101	+				-0.2
1,331,109	-				+0.2
1,331,109	-				+0.4
1,331,145	-				-0.0
1,331,174	+				+0.0
1,331,203	+		SO1279	0.14	+0.4
1,331,210	+		SO1279	0.18	+0.8
1,331,210	+		SO1279	0.18	+0.0
1,331,210	+		SO1279	0.18	-0.4
1,331,210	+		SO1279	0.18	+1.4
1,331,210	+		SO1279	0.18	+0.1
1,331,210	+		SO1279	0.18	+1.1
1,331,281	-		SO1279	0.58	-0.3
1,331,306	+		SO1279	0.72	+0.4
1,331,314	-		SO1279	0.77	+0.5
1,331,320	+		SO1279	0.80	+0.8
1,331,321	-		SO1279	0.81	+0.4
1,331,353	+				-0.1
1,331,359	+				+0.4
1,331,361	-				+0.5
1,331,376	+				+0.0
1,331,376	+				+0.7
1,331,384	-				+0.2
1,331,384	-				-0.1
1,331,433	+				+0.2
1,331,434	+				+0.7
1,331,441	-				-0.4
1,331,444	-				+0.6
1,331,656	-				-0.3
1,331,666	-				-0.7
1,331,747	+				+0.2
1,331,747	+				-0.1
1,331,791	+				-0.2
1,331,807	+				-0.1
1,331,807	+				-0.5
1,331,807	+				+0.6
1,331,807	+				-0.4
1,331,807	+				-0.5
1,331,815	-				+0.2
1,331,815	-				-0.8
1,331,815	-				-0.2
1,331,815	-				-0.4
1,331,815	-				+0.8
1,331,815	-				+0.1
1,331,815	-				-0.3
1,331,815	-				+0.2
1,331,838	+				+0.2
1,331,869	-				-0.4