Strain Fitness in Shewanella oneidensis MR-1 around SO_1211

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
1,257,992	+				-0.2
1,258,018	-				+0.5
1,258,049	-				+0.6
1,258,060	-				-1.5
1,258,270	+		SO1210.1	0.18	-1.9
1,258,397	+		SO1210.1	0.33	-1.1
1,258,581	-		SO1210.1	0.55	-1.0
1,258,602	+		SO1210.1	0.57	-0.0
1,258,615	+		SO1210.1	0.58	-0.9
1,258,717	-		SO1210.1	0.70	-3.7
1,258,947	-				-2.6
1,259,045	-		SO_1211	0.11	-1.0
1,259,211	+		SO_1211	0.34	-2.8
1,259,227	-		SO_1211	0.36	-1.5
1,259,402	+		SO_1211	0.60	-0.5
1,259,437	-		SO_1211	0.65	-1.7
1,259,447	-		SO_1211	0.66	-0.3
1,259,447	-		SO_1211	0.66	-2.7
1,259,498	+		SO_1211	0.73	-1.3
1,259,505	-		SO_1211	0.74	-2.5
1,259,549	-		SO_1211	0.80	-1.1
1,259,617	+		SO_1211	0.89	-2.2
1,259,633	+				-2.4
1,259,689	+				-0.3
1,259,689	-				-0.4
1,259,697	+				+0.4
1,259,705	-				-0.2
1,259,909	-				-0.2
1,260,257	-		SO1213	0.40	+1.0
1,260,411	+		SO1213	0.60	-0.2
1,260,419	-		SO1213	0.61	+1.1
1,260,545	-		SO1213	0.77	+1.3
1,260,601	+		SO1213	0.84	+0.6