Experiment: m.b. copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3199 and HP15_3200 are separated by 13 nucleotides HP15_3200 and HP15_3201 are separated by 19 nucleotides HP15_3201 and HP15_3202 overlap by 8 nucleotides
HP15_3199: HP15_3199 - ribosomal RNA small subunit methyltransferase E, at 3,351,791 to 3,352,510
_3199
HP15_3200: HP15_3200 - membrane protein containing DUF808, at 3,352,524 to 3,353,438
_3200
HP15_3201: HP15_3201 - ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family, at 3,353,458 to 3,354,681
_3201
HP15_3202: HP15_3202 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 3,354,674 to 3,355,957
_3202
Position (kb)
3353
3354
3355 Strain fitness (log2 ratio)
-1
0
1 at 3352.616 kb on + strand, within HP15_3200 at 3352.644 kb on + strand, within HP15_3200 at 3352.662 kb on + strand, within HP15_3200 at 3352.737 kb on + strand, within HP15_3200 at 3352.915 kb on + strand, within HP15_3200 at 3352.943 kb on - strand, within HP15_3200 at 3352.993 kb on - strand, within HP15_3200 at 3353.070 kb on - strand, within HP15_3200 at 3353.140 kb on + strand, within HP15_3200 at 3353.181 kb on - strand, within HP15_3200 at 3353.296 kb on - strand, within HP15_3200 at 3353.331 kb on + strand, within HP15_3200 at 3353.375 kb on + strand at 3353.388 kb on - strand at 3353.477 kb on - strand at 3353.527 kb on - strand at 3353.622 kb on - strand, within HP15_3201 at 3353.804 kb on + strand, within HP15_3201 at 3353.812 kb on - strand, within HP15_3201 at 3353.893 kb on + strand, within HP15_3201 at 3354.061 kb on - strand, within HP15_3201 at 3354.083 kb on + strand, within HP15_3201 at 3354.192 kb on + strand, within HP15_3201 at 3354.224 kb on + strand, within HP15_3201 at 3354.252 kb on + strand, within HP15_3201 at 3354.253 kb on - strand, within HP15_3201 at 3354.293 kb on + strand, within HP15_3201 at 3354.380 kb on - strand, within HP15_3201 at 3354.382 kb on - strand, within HP15_3201 at 3354.407 kb on + strand, within HP15_3201 at 3354.425 kb on - strand, within HP15_3201 at 3354.425 kb on - strand, within HP15_3201 at 3354.425 kb on - strand, within HP15_3201 at 3354.452 kb on - strand, within HP15_3201 at 3354.565 kb on + strand at 3354.720 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 1 mM remove 3,352,616 + HP15_3200 0.10 -0.6 3,352,644 + HP15_3200 0.13 +0.0 3,352,662 + HP15_3200 0.15 +0.1 3,352,737 + HP15_3200 0.23 +0.3 3,352,915 + HP15_3200 0.43 -0.2 3,352,943 - HP15_3200 0.46 +0.0 3,352,993 - HP15_3200 0.51 +0.2 3,353,070 - HP15_3200 0.60 -0.4 3,353,140 + HP15_3200 0.67 -0.0 3,353,181 - HP15_3200 0.72 -0.0 3,353,296 - HP15_3200 0.84 +0.0 3,353,331 + HP15_3200 0.88 +0.2 3,353,375 + +0.2 3,353,388 - +0.1 3,353,477 - -1.6 3,353,527 - -0.5 3,353,622 - HP15_3201 0.13 -0.5 3,353,804 + HP15_3201 0.28 -0.1 3,353,812 - HP15_3201 0.29 -0.5 3,353,893 + HP15_3201 0.36 -0.0 3,354,061 - HP15_3201 0.49 -1.1 3,354,083 + HP15_3201 0.51 +0.8 3,354,192 + HP15_3201 0.60 +0.1 3,354,224 + HP15_3201 0.63 +0.9 3,354,252 + HP15_3201 0.65 -0.2 3,354,253 - HP15_3201 0.65 -0.2 3,354,293 + HP15_3201 0.68 -0.3 3,354,380 - HP15_3201 0.75 +0.3 3,354,382 - HP15_3201 0.75 -0.2 3,354,407 + HP15_3201 0.78 +0.4 3,354,425 - HP15_3201 0.79 -0.3 3,354,425 - HP15_3201 0.79 +0.1 3,354,425 - HP15_3201 0.79 +0.7 3,354,452 - HP15_3201 0.81 -0.1 3,354,565 + +0.1 3,354,720 + +0.0
Or see this region's nucleotide sequence