Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25310

Experiment: m.b. Cobalt chloride 0.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cobalt chloride 0.625 mM
2,634,438	-		PGA1_c25300	0.45	+0.5
2,634,497	+		PGA1_c25300	0.48	-0.2
2,634,497	+		PGA1_c25300	0.48	-0.4
2,634,505	-		PGA1_c25300	0.48	-0.4
2,634,505	-		PGA1_c25300	0.48	-1.8
2,634,513	-		PGA1_c25300	0.49	+0.2
2,634,596	-		PGA1_c25300	0.54	-0.0
2,634,600	+		PGA1_c25300	0.54	+0.2
2,634,600	+		PGA1_c25300	0.54	-1.1
2,634,600	+		PGA1_c25300	0.54	-0.1
2,634,627	-		PGA1_c25300	0.55	-0.0
2,634,632	-		PGA1_c25300	0.56	+0.1
2,634,643	-		PGA1_c25300	0.56	+0.3
2,634,659	+		PGA1_c25300	0.57	+0.7
2,634,679	-		PGA1_c25300	0.58	-1.1
2,634,707	+		PGA1_c25300	0.60	+0.2
2,634,710	-		PGA1_c25300	0.60	-1.0
2,634,729	+		PGA1_c25300	0.61	-2.2
2,634,742	-		PGA1_c25300	0.62	+1.7
2,634,750	+		PGA1_c25300	0.63	-3.0
2,634,750	+		PGA1_c25300	0.63	-0.4
2,634,752	+		PGA1_c25300	0.63	+0.0
2,634,752	+		PGA1_c25300	0.63	+0.2
2,634,752	+		PGA1_c25300	0.63	+1.0
2,634,752	+		PGA1_c25300	0.63	+0.9
2,634,760	-		PGA1_c25300	0.63	+0.2
2,634,760	-		PGA1_c25300	0.63	+0.3
2,634,760	-		PGA1_c25300	0.63	-0.3
2,634,762	+		PGA1_c25300	0.63	-2.0
2,634,762	+		PGA1_c25300	0.63	-0.1
2,634,762	+		PGA1_c25300	0.63	-0.2
2,634,783	+		PGA1_c25300	0.64	+0.5
2,634,797	-		PGA1_c25300	0.65	+0.4
2,634,802	+		PGA1_c25300	0.66	-0.9
2,634,822	+		PGA1_c25300	0.67	-0.4
2,634,845	+		PGA1_c25300	0.68	+0.2
2,634,846	+		PGA1_c25300	0.68	+0.8
2,634,854	-		PGA1_c25300	0.69	+1.8
2,634,903	-		PGA1_c25300	0.71	+0.6
2,634,906	+		PGA1_c25300	0.72	+0.5
2,634,913	-		PGA1_c25300	0.72	-0.7
2,634,913	-		PGA1_c25300	0.72	+2.3
2,634,913	-		PGA1_c25300	0.72	-0.2
2,634,921	-		PGA1_c25300	0.72	-1.6
2,634,921	-		PGA1_c25300	0.72	-2.8
2,634,971	-		PGA1_c25300	0.75	-0.8
2,635,013	-		PGA1_c25300	0.78	+0.7
2,635,015	-		PGA1_c25300	0.78	-0.0
2,635,016	+		PGA1_c25300	0.78	-0.7
2,635,016	+		PGA1_c25300	0.78	-0.3
2,635,051	-		PGA1_c25300	0.80	-0.4
2,635,051	-		PGA1_c25300	0.80	-0.9
2,635,051	-		PGA1_c25300	0.80	+0.1
2,635,082	+		PGA1_c25300	0.82	-0.9
2,635,087	+		PGA1_c25300	0.82	+0.5
2,635,140	+		PGA1_c25300	0.85	-0.0
2,635,148	-		PGA1_c25300	0.86	+1.2
2,635,178	+		PGA1_c25300	0.87	+0.3
2,635,184	-		PGA1_c25300	0.88	+0.3
2,635,233	+				+0.7
2,635,241	+				-0.4
2,635,249	-				+0.8
2,635,322	-				+0.9
2,635,330	-				+0.3
2,635,342	-				-1.8
2,635,343	-				+0.0
2,635,390	-				+0.7
2,635,400	-				+1.0
2,635,400	-				+0.4
2,635,417	-				+0.3
2,635,462	+				+0.0
2,635,471	-				+0.8
2,635,472	+				-0.4
2,635,472	+				-0.9
2,635,480	-				+0.2
2,635,480	-				+0.2
2,635,480	-				-0.4
2,635,495	+				-0.9
2,635,495	+				-0.2
2,635,513	-				-1.4
2,635,571	-		PGA1_c25310	0.12	+0.7
2,635,581	-		PGA1_c25310	0.13	+1.2
2,635,581	-		PGA1_c25310	0.13	-0.8
2,635,581	-		PGA1_c25310	0.13	-1.2
2,635,597	+		PGA1_c25310	0.14	+0.6
2,635,692	-		PGA1_c25310	0.23	+1.2
2,635,726	+		PGA1_c25310	0.25	+0.1
2,635,734	-		PGA1_c25310	0.26	-0.2
2,635,785	+		PGA1_c25310	0.30	+0.2
2,635,793	-		PGA1_c25310	0.31	+1.0
2,635,795	+		PGA1_c25310	0.31	-0.4
2,635,803	-		PGA1_c25310	0.32	+0.9
2,635,837	+		PGA1_c25310	0.35	-1.5
2,635,837	+		PGA1_c25310	0.35	+0.3
2,635,837	+		PGA1_c25310	0.35	+0.7
2,635,845	+		PGA1_c25310	0.36	+0.8
2,635,845	+		PGA1_c25310	0.36	+0.7
2,635,845	+		PGA1_c25310	0.36	+0.7
2,635,845	+		PGA1_c25310	0.36	-0.9
2,635,845	-		PGA1_c25310	0.36	-0.5
2,635,845	-		PGA1_c25310	0.36	-0.2
2,635,845	-		PGA1_c25310	0.36	+1.3
2,635,845	-		PGA1_c25310	0.36	+0.4
2,635,851	+		PGA1_c25310	0.36	+0.7
2,635,853	-		PGA1_c25310	0.36	-1.6
2,635,853	-		PGA1_c25310	0.36	+0.3
2,635,853	-		PGA1_c25310	0.36	+0.2
2,635,853	-		PGA1_c25310	0.36	-0.0
2,635,853	-		PGA1_c25310	0.36	+1.0
2,635,877	+		PGA1_c25310	0.38	-0.0
2,635,890	-		PGA1_c25310	0.40	+0.1
2,635,935	-		PGA1_c25310	0.43	-0.4
2,635,937	+		PGA1_c25310	0.44	+0.7
2,636,010	-		PGA1_c25310	0.50	-0.3
2,636,030	-		PGA1_c25310	0.52	+0.6
2,636,095	+		PGA1_c25310	0.57	-0.4
2,636,117	+		PGA1_c25310	0.59	+0.7
2,636,155	-		PGA1_c25310	0.62	+0.4
2,636,202	-		PGA1_c25310	0.66	-1.2
2,636,212	+		PGA1_c25310	0.67	+0.4
2,636,212	+		PGA1_c25310	0.67	+1.0
2,636,256	-		PGA1_c25310	0.71	+0.1
2,636,288	-		PGA1_c25310	0.74	+0.6
2,636,288	-		PGA1_c25310	0.74	+0.3
2,636,288	-		PGA1_c25310	0.74	-0.8
2,636,342	+		PGA1_c25310	0.78	-3.7
2,636,364	-		PGA1_c25310	0.80	+1.1
2,636,376	-		PGA1_c25310	0.81	+2.5
2,636,443	+		PGA1_c25310	0.87	-0.5
2,636,443	+		PGA1_c25310	0.87	+1.8
2,636,443	+		PGA1_c25310	0.87	+0.4
2,636,519	-				+0.4
2,636,534	-				-0.2
2,636,535	+				+0.3
2,636,535	+				+0.0
2,636,543	-				+0.3
2,636,543	-				-1.4
2,636,543	-				+0.1
2,636,551	+				-0.3
2,636,569	+				-2.2
2,636,578	+				-0.2
2,636,586	-				+0.4
2,636,596	-				-0.0
2,636,596	-				+1.1
2,636,632	+				-0.8
2,636,635	-				-0.2
2,636,637	+				-0.3
2,636,637	+				+0.5
2,636,639	+				-0.0
2,636,642	+				-0.4
2,636,645	-				-1.3
2,636,660	+				-0.9
2,636,660	+				+0.7
2,636,667	-				-0.9
2,636,694	-				-0.3
2,636,717	+				-0.1
2,636,717	+				+1.1
2,636,724	+				+0.4
2,636,767	+		PGA1_c25320	0.11	+1.5
2,636,767	+		PGA1_c25320	0.11	-0.4
2,636,796	+		PGA1_c25320	0.13	+1.9
2,636,809	+		PGA1_c25320	0.14	-1.6
2,636,816	+		PGA1_c25320	0.14	+3.1
2,636,816	+		PGA1_c25320	0.14	+1.2
2,636,824	-		PGA1_c25320	0.15	+0.6
2,636,833	+		PGA1_c25320	0.16	-0.3
2,636,833	+		PGA1_c25320	0.16	+2.5
2,636,840	-		PGA1_c25320	0.16	+0.2
2,636,840	-		PGA1_c25320	0.16	+0.9
2,636,850	-		PGA1_c25320	0.17	-1.1
2,636,865	+		PGA1_c25320	0.18	-0.1
2,636,865	+		PGA1_c25320	0.18	-0.8
2,636,873	-		PGA1_c25320	0.18	+1.3
2,636,953	-		PGA1_c25320	0.23	+1.1
2,636,954	-		PGA1_c25320	0.24	+0.4
2,636,972	+		PGA1_c25320	0.25	+1.2
2,636,972	+		PGA1_c25320	0.25	-0.7
2,636,972	+		PGA1_c25320	0.25	+0.2
2,637,107	+		PGA1_c25320	0.34	+1.0
2,637,107	+		PGA1_c25320	0.34	-0.0
2,637,115	-		PGA1_c25320	0.34	-0.6
2,637,267	+		PGA1_c25320	0.44	-0.2
2,637,328	+		PGA1_c25320	0.48	+1.5
2,637,337	-		PGA1_c25320	0.49	-0.4
2,637,338	+		PGA1_c25320	0.49	+0.3
2,637,338	+		PGA1_c25320	0.49	+0.1
2,637,338	+		PGA1_c25320	0.49	-1.3
2,637,346	-		PGA1_c25320	0.49	-0.7
2,637,346	-		PGA1_c25320	0.49	+1.1
2,637,346	-		PGA1_c25320	0.49	+0.5
2,637,346	-		PGA1_c25320	0.49	+0.3
2,637,346	-		PGA1_c25320	0.49	-0.7
2,637,346	-		PGA1_c25320	0.49	-0.0
2,637,417	+		PGA1_c25320	0.54	+0.6
2,637,441	+		PGA1_c25320	0.56	-0.4
2,637,441	+		PGA1_c25320	0.56	+1.9
2,637,449	+		PGA1_c25320	0.56	+1.6
2,637,449	+		PGA1_c25320	0.56	+0.6
2,637,449	-		PGA1_c25320	0.56	+0.1
2,637,449	-		PGA1_c25320	0.56	-0.2
2,637,455	+		PGA1_c25320	0.57	+0.2
2,637,456	+		PGA1_c25320	0.57	+0.2
2,637,456	+		PGA1_c25320	0.57	+0.2
2,637,456	+		PGA1_c25320	0.57	+1.0
2,637,456	+		PGA1_c25320	0.57	+0.3
2,637,456	+		PGA1_c25320	0.57	-0.3
2,637,456	+		PGA1_c25320	0.57	+0.7
2,637,456	+		PGA1_c25320	0.57	-1.1
2,637,456	+		PGA1_c25320	0.57	+1.2
2,637,456	+		PGA1_c25320	0.57	+1.0
2,637,456	+		PGA1_c25320	0.57	-0.4
2,637,456	+		PGA1_c25320	0.57	-1.4
2,637,456	+		PGA1_c25320	0.57	+0.8
2,637,456	+		PGA1_c25320	0.57	+0.9
2,637,464	-		PGA1_c25320	0.57	+0.1
2,637,464	-		PGA1_c25320	0.57	-0.1
2,637,464	-		PGA1_c25320	0.57	-1.4
2,637,464	-		PGA1_c25320	0.57	+0.9
2,637,464	-		PGA1_c25320	0.57	+2.1
2,637,464	-		PGA1_c25320	0.57	-1.6
2,637,506	-		PGA1_c25320	0.60	-0.2
2,637,523	+		PGA1_c25320	0.61	-1.3
2,637,523	+		PGA1_c25320	0.61	-2.0
2,637,523	+		PGA1_c25320	0.61	+0.5
2,637,523	+		PGA1_c25320	0.61	+0.7
2,637,523	+		PGA1_c25320	0.61	-0.2
2,637,531	-		PGA1_c25320	0.62	-0.8
2,637,531	-		PGA1_c25320	0.62	-0.2
2,637,531	-		PGA1_c25320	0.62	+0.5
2,637,531	-		PGA1_c25320	0.62	-0.4
2,637,531	-		PGA1_c25320	0.62	-0.8
2,637,550	+		PGA1_c25320	0.63	-2.2
2,637,555	+		PGA1_c25320	0.63	-0.6
2,637,558	-		PGA1_c25320	0.63	+0.7
2,637,558	-		PGA1_c25320	0.63	+0.5