Experiment: m.b. copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1537 and HP15_1538 are separated by 23 nucleotides HP15_1538 and HP15_1539 are separated by 12 nucleotides HP15_1539 and HP15_1540 are separated by 73 nucleotides
HP15_1537: HP15_1537 - conserved hypothetical protein, at 1,621,375 to 1,622,631
_1537
HP15_1538: HP15_1538 - conserved hypothetical protein, at 1,622,655 to 1,624,124
_1538
HP15_1539: HP15_1539 - CBS domain containing protein, at 1,624,137 to 1,624,769
_1539
HP15_1540: HP15_1540 - protein YfcK, at 1,624,843 to 1,626,741
_1540
Position (kb)
1622
1623
1624
1625 Strain fitness (log2 ratio)
-1
0
1 at 1621.665 kb on - strand, within HP15_1537 at 1621.756 kb on - strand, within HP15_1537 at 1621.825 kb on + strand, within HP15_1537 at 1622.077 kb on + strand, within HP15_1537 at 1622.077 kb on + strand, within HP15_1537 at 1622.156 kb on + strand, within HP15_1537 at 1622.193 kb on + strand, within HP15_1537 at 1622.193 kb on + strand, within HP15_1537 at 1622.193 kb on + strand, within HP15_1537 at 1622.249 kb on + strand, within HP15_1537 at 1622.257 kb on - strand, within HP15_1537 at 1622.293 kb on + strand, within HP15_1537 at 1622.301 kb on - strand, within HP15_1537 at 1622.311 kb on - strand, within HP15_1537 at 1622.320 kb on - strand, within HP15_1537 at 1622.392 kb on - strand, within HP15_1537 at 1622.472 kb on + strand, within HP15_1537 at 1622.493 kb on + strand, within HP15_1537 at 1622.555 kb on + strand at 1622.701 kb on - strand at 1622.713 kb on + strand at 1622.749 kb on - strand at 1622.768 kb on - strand at 1622.921 kb on - strand, within HP15_1538 at 1622.967 kb on - strand, within HP15_1538 at 1622.973 kb on + strand, within HP15_1538 at 1622.981 kb on - strand, within HP15_1538 at 1623.157 kb on + strand, within HP15_1538 at 1623.212 kb on - strand, within HP15_1538 at 1623.653 kb on + strand, within HP15_1538 at 1623.661 kb on - strand, within HP15_1538 at 1623.710 kb on + strand, within HP15_1538 at 1623.710 kb on + strand, within HP15_1538 at 1623.710 kb on + strand, within HP15_1538 at 1623.905 kb on - strand, within HP15_1538 at 1623.986 kb on + strand at 1624.093 kb on - strand at 1624.584 kb on - strand, within HP15_1539 at 1624.699 kb on + strand, within HP15_1539 at 1624.701 kb on - strand, within HP15_1539 at 1624.804 kb on + strand at 1624.964 kb on + strand at 1624.972 kb on - strand at 1624.999 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 1 mM remove 1,621,665 - HP15_1537 0.23 +0.1 1,621,756 - HP15_1537 0.30 +0.1 1,621,825 + HP15_1537 0.36 +0.1 1,622,077 + HP15_1537 0.56 +0.4 1,622,077 + HP15_1537 0.56 -0.6 1,622,156 + HP15_1537 0.62 +0.3 1,622,193 + HP15_1537 0.65 +0.2 1,622,193 + HP15_1537 0.65 +0.6 1,622,193 + HP15_1537 0.65 +0.8 1,622,249 + HP15_1537 0.70 -0.0 1,622,257 - HP15_1537 0.70 +0.4 1,622,293 + HP15_1537 0.73 -0.1 1,622,301 - HP15_1537 0.74 -0.2 1,622,311 - HP15_1537 0.74 -0.1 1,622,320 - HP15_1537 0.75 -0.3 1,622,392 - HP15_1537 0.81 +0.4 1,622,472 + HP15_1537 0.87 -0.3 1,622,493 + HP15_1537 0.89 +0.2 1,622,555 + +0.2 1,622,701 - +0.1 1,622,713 + +0.0 1,622,749 - -0.2 1,622,768 - +0.6 1,622,921 - HP15_1538 0.18 -0.4 1,622,967 - HP15_1538 0.21 +0.1 1,622,973 + HP15_1538 0.22 +0.1 1,622,981 - HP15_1538 0.22 +0.4 1,623,157 + HP15_1538 0.34 +0.1 1,623,212 - HP15_1538 0.38 +0.1 1,623,653 + HP15_1538 0.68 +0.3 1,623,661 - HP15_1538 0.68 +0.5 1,623,710 + HP15_1538 0.72 +0.1 1,623,710 + HP15_1538 0.72 -0.8 1,623,710 + HP15_1538 0.72 +0.4 1,623,905 - HP15_1538 0.85 -0.5 1,623,986 + +0.2 1,624,093 - +0.5 1,624,584 - HP15_1539 0.71 -0.3 1,624,699 + HP15_1539 0.89 -1.7 1,624,701 - HP15_1539 0.89 -0.3 1,624,804 + -0.1 1,624,964 + -0.6 1,624,972 - +0.3 1,624,999 - -0.1
Or see this region's nucleotide sequence