Experiment: m.b. copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_153 and HP15_154 are separated by 735 nucleotides HP15_154 and HP15_155 overlap by 4 nucleotides HP15_155 and HP15_156 are separated by 49 nucleotides
HP15_153: HP15_153 - DSBA oxidoreductase, at 153,127 to 153,918
_153
HP15_154: HP15_154 - membrane protein, at 154,654 to 154,956
_154
HP15_155: HP15_155 - conserved hypothetical protein, membrane, at 154,953 to 155,630
_155
HP15_156: HP15_156 - conserved hypothetical protein, at 155,680 to 155,997
_156
Position (kb) 154
155 Strain fitness (log2 ratio) -1
0
1 at 153.724 kb on + strand, within HP15_153 at 153.732 kb on - strand, within HP15_153 at 153.732 kb on - strand, within HP15_153 at 153.827 kb on + strand, within HP15_153 at 153.942 kb on + strand at 153.950 kb on - strand at 153.950 kb on - strand at 153.970 kb on + strand at 154.131 kb on - strand at 154.187 kb on + strand at 154.201 kb on - strand at 154.233 kb on - strand at 154.252 kb on - strand at 154.325 kb on + strand at 154.420 kb on - strand at 154.443 kb on + strand at 154.461 kb on - strand at 154.461 kb on - strand at 154.473 kb on - strand at 154.494 kb on - strand at 154.552 kb on + strand at 154.588 kb on - strand at 154.613 kb on - strand at 154.617 kb on + strand at 154.617 kb on + strand at 154.625 kb on - strand at 154.738 kb on + strand, within HP15_154 at 154.746 kb on - strand, within HP15_154 at 154.761 kb on - strand, within HP15_154 at 154.761 kb on - strand, within HP15_154 at 154.777 kb on + strand, within HP15_154 at 154.824 kb on + strand, within HP15_154 at 154.832 kb on - strand, within HP15_154 at 154.861 kb on + strand, within HP15_154 at 154.861 kb on + strand, within HP15_154 at 154.902 kb on + strand, within HP15_154 at 154.910 kb on - strand, within HP15_154 at 154.979 kb on + strand at 154.989 kb on - strand at 155.001 kb on + strand at 155.009 kb on + strand at 155.009 kb on + strand at 155.023 kb on - strand, within HP15_155 at 155.035 kb on + strand, within HP15_155 at 155.134 kb on - strand, within HP15_155 at 155.147 kb on - strand, within HP15_155 at 155.163 kb on + strand, within HP15_155 at 155.322 kb on + strand, within HP15_155 at 155.354 kb on - strand, within HP15_155 at 155.363 kb on - strand, within HP15_155 at 155.380 kb on - strand, within HP15_155 at 155.519 kb on + strand, within HP15_155 at 155.519 kb on + strand, within HP15_155 at 155.519 kb on + strand, within HP15_155 at 155.534 kb on - strand, within HP15_155 at 155.538 kb on + strand, within HP15_155 at 155.546 kb on - strand, within HP15_155 at 155.546 kb on - strand, within HP15_155 at 155.571 kb on + strand at 155.571 kb on + strand at 155.579 kb on - strand at 155.598 kb on - strand at 155.598 kb on - strand at 155.630 kb on + strand at 155.639 kb on + strand at 155.639 kb on + strand at 155.649 kb on - strand at 155.683 kb on - strand at 155.688 kb on + strand at 155.698 kb on + strand at 155.788 kb on + strand, within HP15_156 at 155.882 kb on + strand, within HP15_156 at 155.884 kb on - strand, within HP15_156 at 155.884 kb on - strand, within HP15_156
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 1 mM remove 153,724 + HP15_153 0.75 -0.1 153,732 - HP15_153 0.76 -0.1 153,732 - HP15_153 0.76 +0.3 153,827 + HP15_153 0.88 +0.2 153,942 + -0.4 153,950 - -0.1 153,950 - -0.2 153,970 + +0.7 154,131 - +1.4 154,187 + -0.4 154,201 - -0.2 154,233 - +0.7 154,252 - +0.3 154,325 + -0.1 154,420 - +0.0 154,443 + -0.8 154,461 - +0.2 154,461 - -0.3 154,473 - +0.2 154,494 - -0.3 154,552 + -0.2 154,588 - -0.2 154,613 - -0.3 154,617 + +0.2 154,617 + -0.6 154,625 - +0.9 154,738 + HP15_154 0.28 +0.1 154,746 - HP15_154 0.30 +0.2 154,761 - HP15_154 0.35 -0.7 154,761 - HP15_154 0.35 -0.1 154,777 + HP15_154 0.41 +0.0 154,824 + HP15_154 0.56 -0.1 154,832 - HP15_154 0.59 +0.2 154,861 + HP15_154 0.68 -1.3 154,861 + HP15_154 0.68 -0.3 154,902 + HP15_154 0.82 -1.2 154,910 - HP15_154 0.84 -0.6 154,979 + -1.2 154,989 - -0.6 155,001 + +0.6 155,009 + -0.4 155,009 + +0.3 155,023 - HP15_155 0.10 +0.1 155,035 + HP15_155 0.12 +0.4 155,134 - HP15_155 0.27 -0.6 155,147 - HP15_155 0.29 +0.2 155,163 + HP15_155 0.31 +0.3 155,322 + HP15_155 0.54 -0.3 155,354 - HP15_155 0.59 -0.4 155,363 - HP15_155 0.60 +0.2 155,380 - HP15_155 0.63 -0.4 155,519 + HP15_155 0.83 +0.2 155,519 + HP15_155 0.83 +0.1 155,519 + HP15_155 0.83 +0.0 155,534 - HP15_155 0.86 +0.3 155,538 + HP15_155 0.86 +0.1 155,546 - HP15_155 0.87 -1.0 155,546 - HP15_155 0.87 -0.9 155,571 + -0.1 155,571 + +0.6 155,579 - -0.4 155,598 - -0.8 155,598 - +0.3 155,630 + +1.5 155,639 + +0.1 155,639 + +0.1 155,649 - +0.3 155,683 - -0.1 155,688 + -0.4 155,698 + -0.2 155,788 + HP15_156 0.34 -0.2 155,882 + HP15_156 0.64 +0.1 155,884 - HP15_156 0.64 -0.3 155,884 - HP15_156 0.64 -0.7
Or see this region's nucleotide sequence