Experiment: m.b. copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1248 and HP15_1249 overlap by 4 nucleotides HP15_1249 and HP15_1250 are separated by 53 nucleotides HP15_1250 and HP15_1251 are separated by 97 nucleotides
HP15_1248: HP15_1248 - response regulator/TPR domain protein, at 1,304,910 to 1,306,547
_1248
HP15_1249: HP15_1249 - two-component system sensor protein, at 1,306,544 to 1,310,062
_1249
HP15_1250: HP15_1250 - conserved hypothetical protein, membrane, at 1,310,116 to 1,310,622
_1250
HP15_1251: HP15_1251 - large component of pyruvate transporter (actP-like) (from data) , at 1,310,720 to 1,312,486
_1251
Position (kb)
1306
1307
1308
1309
1310
1311 Strain fitness (log2 ratio)
-2
-1
0
1 at 1305.596 kb on + strand, within HP15_1248 at 1305.599 kb on - strand, within HP15_1248 at 1305.692 kb on + strand, within HP15_1248 at 1305.821 kb on + strand, within HP15_1248 at 1305.871 kb on - strand, within HP15_1248 at 1306.062 kb on + strand, within HP15_1248 at 1306.185 kb on - strand, within HP15_1248 at 1306.394 kb on + strand at 1306.531 kb on + strand at 1306.768 kb on + strand at 1306.922 kb on + strand, within HP15_1249 at 1306.965 kb on + strand, within HP15_1249 at 1310.131 kb on - strand at 1310.163 kb on + strand at 1310.163 kb on + strand at 1310.171 kb on - strand, within HP15_1250 at 1310.171 kb on - strand, within HP15_1250 at 1310.171 kb on - strand, within HP15_1250 at 1310.171 kb on - strand, within HP15_1250 at 1310.205 kb on - strand, within HP15_1250 at 1310.261 kb on + strand, within HP15_1250 at 1310.367 kb on - strand, within HP15_1250 at 1310.368 kb on - strand, within HP15_1250 at 1310.472 kb on - strand, within HP15_1250 at 1310.573 kb on - strand at 1310.573 kb on - strand at 1310.601 kb on - strand at 1310.952 kb on + strand, within HP15_1251 at 1310.959 kb on - strand, within HP15_1251 at 1310.978 kb on + strand, within HP15_1251
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 1 mM remove 1,305,596 + HP15_1248 0.42 +0.4 1,305,599 - HP15_1248 0.42 -0.3 1,305,692 + HP15_1248 0.48 +0.1 1,305,821 + HP15_1248 0.56 -0.8 1,305,871 - HP15_1248 0.59 +0.7 1,306,062 + HP15_1248 0.70 -0.5 1,306,185 - HP15_1248 0.78 -1.0 1,306,394 + -0.2 1,306,531 + +0.1 1,306,768 + -0.6 1,306,922 + HP15_1249 0.11 -2.0 1,306,965 + HP15_1249 0.12 -1.5 1,310,131 - +0.8 1,310,163 + -0.6 1,310,163 + -1.6 1,310,171 - HP15_1250 0.11 +0.7 1,310,171 - HP15_1250 0.11 +0.9 1,310,171 - HP15_1250 0.11 +0.2 1,310,171 - HP15_1250 0.11 -0.8 1,310,205 - HP15_1250 0.18 -0.4 1,310,261 + HP15_1250 0.29 -1.0 1,310,367 - HP15_1250 0.50 +0.8 1,310,368 - HP15_1250 0.50 -0.0 1,310,472 - HP15_1250 0.70 -1.4 1,310,573 - -0.0 1,310,573 - +0.1 1,310,601 - +0.2 1,310,952 + HP15_1251 0.13 -0.1 1,310,959 - HP15_1251 0.14 +0.4 1,310,978 + HP15_1251 0.15 -0.4
Or see this region's nucleotide sequence