Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21700

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
2,249,414	+		PGA1_c21690	0.33	+0.6
2,249,422	+		PGA1_c21690	0.34	+0.0
2,249,442	+		PGA1_c21690	0.35	+0.9
2,249,509	+		PGA1_c21690	0.41	-0.3
2,249,528	-		PGA1_c21690	0.43	+0.1
2,249,617	+		PGA1_c21690	0.50	+0.2
2,249,625	-		PGA1_c21690	0.51	-1.0
2,249,625	-		PGA1_c21690	0.51	+0.0
2,249,625	-		PGA1_c21690	0.51	+0.5
2,249,676	-		PGA1_c21690	0.55	+0.1
2,249,677	+		PGA1_c21690	0.55	+0.1
2,249,744	-		PGA1_c21690	0.60	+1.1
2,249,766	-		PGA1_c21690	0.62	+0.2
2,249,830	+		PGA1_c21690	0.67	+1.3
2,249,871	+		PGA1_c21690	0.71	+0.2
2,249,915	+		PGA1_c21690	0.75	+0.5
2,249,915	-		PGA1_c21690	0.75	+1.7
2,249,941	-		PGA1_c21690	0.77	-1.8
2,249,956	-		PGA1_c21690	0.78	-0.3
2,250,091	+		PGA1_c21690	0.89	+1.5
2,250,117	-				-1.6
2,250,120	+				+0.6
2,250,126	+				+0.3
2,250,128	-				+0.7
2,250,180	+				+0.6
2,250,180	+				-1.3
2,250,231	+				+0.2
2,250,232	-				-0.8
2,250,232	-				+0.2
2,250,239	-				-0.6
2,250,239	-				-0.1
2,250,254	+				-1.7
2,250,254	+				+0.3
2,250,262	-				-0.9
2,250,272	+				+2.3
2,250,279	-				+0.9
2,250,324	+				-0.4
2,250,342	-				-0.2
2,250,363	+				-0.3
2,250,365	-				-0.4
2,250,368	+				+0.3
2,250,376	-				+0.2
2,250,414	+				-1.5
2,250,419	-				+0.4
2,250,422	-				-0.1
2,250,422	-				+0.0
2,250,432	-				-0.9
2,250,432	-				+1.9
2,250,432	-				+0.8
2,250,515	-		PGA1_c21700	0.23	+0.6
2,250,537	+		PGA1_c21700	0.27	-0.4
2,250,537	+		PGA1_c21700	0.27	-0.2
2,250,545	-		PGA1_c21700	0.28	+0.4
2,250,546	+		PGA1_c21700	0.28	+0.8
2,250,558	-		PGA1_c21700	0.30	-1.8
2,250,558	-		PGA1_c21700	0.30	+1.2
2,250,580	-		PGA1_c21700	0.34	-0.2
2,250,581	-		PGA1_c21700	0.34	+0.2
2,250,605	+		PGA1_c21700	0.39	+0.1
2,250,624	+		PGA1_c21700	0.42	+0.2
2,250,632	-		PGA1_c21700	0.43	+0.1
2,250,632	-		PGA1_c21700	0.43	+0.1
2,250,645	-		PGA1_c21700	0.45	+0.4
2,250,671	+		PGA1_c21700	0.50	+0.3
2,250,671	+		PGA1_c21700	0.50	-0.2
2,250,671	+		PGA1_c21700	0.50	-0.2
2,250,689	-		PGA1_c21700	0.53	+0.1
2,250,709	+		PGA1_c21700	0.57	-1.5
2,250,718	-		PGA1_c21700	0.58	-0.2
2,250,804	-		PGA1_c21700	0.73	+0.3
2,250,820	-		PGA1_c21700	0.76	-1.1
2,250,842	+		PGA1_c21700	0.80	-1.3
2,250,853	-		PGA1_c21700	0.82	+0.3
2,250,998	-				+0.6
2,251,022	+				-1.2
2,251,027	+				-0.4
2,251,027	+				-1.9
2,251,027	+				+0.8
2,251,027	+				+1.3
2,251,035	-				+0.8
2,251,035	-				-2.3
2,251,035	-				+0.2
2,251,069	+				+0.5
2,251,069	+				+1.5
2,251,161	-		PGA1_c21710	0.15	+0.6
2,251,317	+		PGA1_c21710	0.30	-0.9
2,251,354	-		PGA1_c21710	0.33	-0.1
2,251,393	-		PGA1_c21710	0.37	+1.1
2,251,463	+		PGA1_c21710	0.43	-0.8
2,251,473	+		PGA1_c21710	0.44	-2.0
2,251,514	-		PGA1_c21710	0.48	+0.9
2,251,524	-		PGA1_c21710	0.49	+1.0
2,251,524	-		PGA1_c21710	0.49	-0.0
2,251,540	-		PGA1_c21710	0.50	-0.8
2,251,573	+		PGA1_c21710	0.53	+1.4
2,251,580	-		PGA1_c21710	0.54	-0.2
2,251,605	-		PGA1_c21710	0.56	-0.2
2,251,605	-		PGA1_c21710	0.56	-0.1
2,251,605	-		PGA1_c21710	0.56	-0.0
2,251,644	+		PGA1_c21710	0.60	+0.6
2,251,769	+		PGA1_c21710	0.71	-0.3
2,251,777	-		PGA1_c21710	0.72	-0.2
2,251,782	-		PGA1_c21710	0.72	+1.4
2,251,855	-		PGA1_c21710	0.79	-1.0
2,251,880	+		PGA1_c21710	0.81	+0.2