Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21660

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
2,243,115	+		PGA1_c21640	0.68	-0.1
2,243,121	+		PGA1_c21640	0.71	-0.0
2,243,128	-		PGA1_c21640	0.75	-0.8
2,243,166	+				+0.6
2,243,176	-				-1.6
2,243,184	+				+0.9
2,243,190	-				-1.5
2,243,190	-				+0.3
2,243,192	-				+0.9
2,243,192	-				-0.8
2,243,197	-				-0.5
2,243,247	-				-0.5
2,243,247	-				-0.3
2,243,247	-				+1.1
2,243,256	+				-0.7
2,243,256	+				+0.4
2,243,256	-				-0.2
2,243,256	-				-0.4
2,243,325	-				+1.2
2,243,338	+				+1.0
2,243,341	-				-0.5
2,243,341	-				-2.1
2,243,470	-				-0.3
2,243,508	+				-0.1
2,243,509	+				+0.2
2,243,516	+				-0.3
2,243,517	-				-1.6
2,243,579	-		PGA1_c21650	0.28	-0.0
2,243,583	+		PGA1_c21650	0.30	-0.1
2,243,591	-		PGA1_c21650	0.33	-0.2
2,243,690	-		PGA1_c21650	0.74	+0.6
2,243,703	-		PGA1_c21650	0.80	-2.7
2,243,749	-				-0.6
2,243,772	+				+0.3
2,243,791	-				+0.6
2,243,817	-				-0.5
2,243,819	+				+0.9
2,243,819	+				-0.2
2,243,827	-				+0.1
2,243,827	-				-0.6
2,243,827	-				-0.3
2,243,865	-				-0.6
2,243,878	+				-0.4
2,243,923	+				-3.0
2,243,930	+				-0.1
2,243,938	-				+0.1
2,244,102	+		PGA1_c21660	0.10	+1.1
2,244,110	-		PGA1_c21660	0.11	-0.8
2,244,129	-		PGA1_c21660	0.12	-2.7
2,244,165	+		PGA1_c21660	0.14	-1.9
2,244,173	-		PGA1_c21660	0.15	-0.9
2,244,176	+		PGA1_c21660	0.15	+1.5
2,244,218	+		PGA1_c21660	0.17	-1.0
2,244,262	-		PGA1_c21660	0.20	-1.7
2,244,310	+		PGA1_c21660	0.23	+1.0
2,244,318	-		PGA1_c21660	0.23	-1.1
2,244,318	-		PGA1_c21660	0.23	+0.4
2,244,338	+		PGA1_c21660	0.25	+1.9
2,244,473	+		PGA1_c21660	0.33	+1.1
2,244,579	+		PGA1_c21660	0.39	+0.1
2,244,587	-		PGA1_c21660	0.40	-1.1
2,244,587	-		PGA1_c21660	0.40	+1.1
2,244,625	+		PGA1_c21660	0.42	+1.5
2,244,709	+		PGA1_c21660	0.47	+2.4
2,244,717	-		PGA1_c21660	0.47	-0.3
2,244,725	-		PGA1_c21660	0.48	+0.8
2,244,726	-		PGA1_c21660	0.48	+0.8
2,244,726	-		PGA1_c21660	0.48	+1.5
2,244,876	+		PGA1_c21660	0.57	+0.6
2,244,889	-		PGA1_c21660	0.58	+1.2
2,244,998	+		PGA1_c21660	0.64	+1.7
2,245,003	+		PGA1_c21660	0.65	+0.7
2,245,003	+		PGA1_c21660	0.65	+1.1
2,245,003	+		PGA1_c21660	0.65	+0.8
2,245,011	-		PGA1_c21660	0.65	+1.6
2,245,011	-		PGA1_c21660	0.65	+0.6
2,245,018	-		PGA1_c21660	0.66	+1.7
2,245,051	-		PGA1_c21660	0.68	+0.9
2,245,053	-		PGA1_c21660	0.68	-0.3
2,245,066	-		PGA1_c21660	0.68	+0.1
2,245,113	-		PGA1_c21660	0.71	-0.3
2,245,152	-		PGA1_c21660	0.74	+0.1
2,245,190	+		PGA1_c21660	0.76	+1.1
2,245,252	-		PGA1_c21660	0.80	+1.0
2,245,376	-		PGA1_c21660	0.87	-0.7
2,245,376	-		PGA1_c21660	0.87	-0.4
2,245,376	-		PGA1_c21660	0.87	+0.2
2,245,461	+				+1.2
2,245,529	+				+0.8
2,245,529	+				+1.6
2,245,615	+				+1.0
2,245,615	+				-0.2
2,245,616	+				+0.7
2,245,616	+				+1.8
2,245,616	+				+1.2
2,245,623	-				-0.2
2,245,624	-				+0.5
2,245,626	+				+0.9
2,245,634	-				+0.9
2,245,846	-				-1.4
2,245,893	-				-0.8
2,245,893	-				-0.5
2,246,061	-		PGA1_c21670	0.18	+0.1
2,246,203	+		PGA1_c21670	0.28	-0.0
2,246,211	-		PGA1_c21670	0.28	+1.5
2,246,216	+		PGA1_c21670	0.29	-0.2
2,246,232	+		PGA1_c21670	0.30	+1.2
2,246,247	+		PGA1_c21670	0.31	+1.0
2,246,270	-		PGA1_c21670	0.32	+0.1
2,246,278	-		PGA1_c21670	0.33	-1.1
2,246,288	-		PGA1_c21670	0.34	-1.1
2,246,374	+		PGA1_c21670	0.40	+1.5
2,246,404	+		PGA1_c21670	0.42	-0.2
2,246,404	+		PGA1_c21670	0.42	+1.0
2,246,407	-		PGA1_c21670	0.42	-1.4
2,246,417	-		PGA1_c21670	0.42	+0.7
2,246,417	-		PGA1_c21670	0.42	+2.0
2,246,463	-		PGA1_c21670	0.46	+0.4
2,246,502	+		PGA1_c21670	0.48	+0.4