Experiment: Glucose defined media 37C sample1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0206 and Psest_0207 are separated by 78 nucleotides Psest_0207 and Psest_0208 are separated by 1 nucleotides Psest_0208 and Psest_0209 are separated by 1 nucleotides
Psest_0206: Psest_0206 - Uncharacterized protein conserved in bacteria, at 206,341 to 207,315
_0206
Psest_0207: Psest_0207 - hypothetical protein, at 207,394 to 207,837
_0207
Psest_0208: Psest_0208 - Uncharacterized protein conserved in bacteria, at 207,839 to 209,353
_0208
Psest_0209: Psest_0209 - membrane protein AbrB duplication, at 209,355 to 210,383
_0209
Position (kb) 207
208
209
210 Strain fitness (log2 ratio) -2
-1
0
1
2 at 206.888 kb on - strand, within Psest_0206 at 207.077 kb on - strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.109 kb on + strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.110 kb on - strand, within Psest_0206 at 207.277 kb on + strand at 207.277 kb on + strand at 207.277 kb on + strand at 207.277 kb on + strand at 207.277 kb on + strand at 207.277 kb on + strand at 207.278 kb on - strand at 207.278 kb on - strand at 207.314 kb on - strand at 207.344 kb on - strand at 207.397 kb on + strand at 207.397 kb on + strand at 207.397 kb on + strand at 207.397 kb on + strand at 207.397 kb on + strand at 207.397 kb on + strand at 207.397 kb on + strand at 207.397 kb on + strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.398 kb on - strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.401 kb on + strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.402 kb on - strand at 207.640 kb on + strand, within Psest_0207 at 207.640 kb on + strand, within Psest_0207 at 207.640 kb on + strand, within Psest_0207 at 207.641 kb on - strand, within Psest_0207 at 207.641 kb on - strand, within Psest_0207 at 207.770 kb on - strand, within Psest_0207 at 207.785 kb on - strand, within Psest_0207 at 208.047 kb on - strand, within Psest_0208 at 208.283 kb on + strand, within Psest_0208 at 208.283 kb on + strand, within Psest_0208 at 208.283 kb on + strand, within Psest_0208 at 208.283 kb on + strand, within Psest_0208 at 208.416 kb on - strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.679 kb on + strand, within Psest_0208 at 208.680 kb on - strand, within Psest_0208 at 208.680 kb on - strand, within Psest_0208 at 208.680 kb on - strand, within Psest_0208 at 208.680 kb on - strand, within Psest_0208 at 208.680 kb on - strand, within Psest_0208 at 208.859 kb on + strand, within Psest_0208 at 208.859 kb on + strand, within Psest_0208 at 208.860 kb on - strand, within Psest_0208 at 208.860 kb on - strand, within Psest_0208 at 208.860 kb on - strand, within Psest_0208 at 208.860 kb on - strand, within Psest_0208 at 209.054 kb on + strand, within Psest_0208 at 209.055 kb on - strand, within Psest_0208 at 209.114 kb on + strand, within Psest_0208 at 209.238 kb on - strand at 209.238 kb on - strand at 209.309 kb on + strand at 209.509 kb on + strand, within Psest_0209 at 209.899 kb on + strand, within Psest_0209
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose defined media 37C sample1 remove 206,888 - Psest_0206 0.56 -0.6 207,077 - Psest_0206 0.75 +0.0 207,109 + Psest_0206 0.79 -1.0 207,109 + Psest_0206 0.79 +0.1 207,109 + Psest_0206 0.79 -0.6 207,109 + Psest_0206 0.79 -0.7 207,109 + Psest_0206 0.79 +0.3 207,109 + Psest_0206 0.79 +0.0 207,109 + Psest_0206 0.79 -1.3 207,109 + Psest_0206 0.79 -0.6 207,109 + Psest_0206 0.79 +1.6 207,109 + Psest_0206 0.79 -0.3 207,109 + Psest_0206 0.79 +2.0 207,109 + Psest_0206 0.79 +0.1 207,110 - Psest_0206 0.79 +0.0 207,110 - Psest_0206 0.79 +0.6 207,110 - Psest_0206 0.79 -0.9 207,110 - Psest_0206 0.79 -0.4 207,110 - Psest_0206 0.79 -0.2 207,110 - Psest_0206 0.79 +1.0 207,110 - Psest_0206 0.79 +0.0 207,110 - Psest_0206 0.79 -1.6 207,110 - Psest_0206 0.79 +0.0 207,110 - Psest_0206 0.79 -0.4 207,110 - Psest_0206 0.79 -1.2 207,110 - Psest_0206 0.79 +1.0 207,110 - Psest_0206 0.79 -0.6 207,110 - Psest_0206 0.79 +0.3 207,277 + -0.6 207,277 + +0.0 207,277 + -0.5 207,277 + +0.0 207,277 + -0.1 207,277 + -1.0 207,278 - +0.3 207,278 - +0.0 207,314 - +2.0 207,344 - +1.4 207,397 + +1.0 207,397 + -1.0 207,397 + -0.8 207,397 + +0.0 207,397 + -2.3 207,397 + -0.6 207,397 + +0.6 207,397 + -1.3 207,398 - -0.3 207,398 - -0.7 207,398 - -1.4 207,398 - +1.0 207,398 - -1.3 207,398 - +0.0 207,398 - -0.2 207,398 - +0.6 207,398 - +0.6 207,398 - -1.0 207,398 - +0.3 207,398 - +0.0 207,398 - -1.0 207,398 - -2.7 207,398 - +0.4 207,398 - +0.0 207,398 - -0.4 207,398 - +0.0 207,401 + +1.2 207,401 + +0.0 207,401 + -0.6 207,401 + -0.1 207,401 + +1.6 207,401 + +0.0 207,401 + +2.0 207,401 + -1.8 207,401 + +1.4 207,401 + -0.6 207,401 + -1.7 207,401 + -0.9 207,402 - +0.4 207,402 - +0.1 207,402 - +0.5 207,402 - +1.0 207,402 - -0.6 207,402 - +0.6 207,402 - +0.6 207,402 - -0.7 207,402 - +0.6 207,402 - +2.0 207,402 - +1.0 207,402 - -0.5 207,402 - +0.8 207,402 - +0.0 207,402 - +0.3 207,402 - +0.7 207,640 + Psest_0207 0.55 +0.0 207,640 + Psest_0207 0.55 -0.3 207,640 + Psest_0207 0.55 +1.0 207,641 - Psest_0207 0.56 -1.2 207,641 - Psest_0207 0.56 -0.2 207,770 - Psest_0207 0.85 +1.0 207,785 - Psest_0207 0.88 -0.2 208,047 - Psest_0208 0.14 -0.5 208,283 + Psest_0208 0.29 +0.2 208,283 + Psest_0208 0.29 -1.4 208,283 + Psest_0208 0.29 -2.1 208,283 + Psest_0208 0.29 -2.3 208,416 - Psest_0208 0.38 -1.6 208,679 + Psest_0208 0.55 -2.3 208,679 + Psest_0208 0.55 -1.3 208,679 + Psest_0208 0.55 +0.0 208,679 + Psest_0208 0.55 +0.4 208,679 + Psest_0208 0.55 -0.3 208,679 + Psest_0208 0.55 +2.6 208,679 + Psest_0208 0.55 +0.2 208,679 + Psest_0208 0.55 +1.0 208,679 + Psest_0208 0.55 -1.0 208,679 + Psest_0208 0.55 -0.9 208,679 + Psest_0208 0.55 +1.0 208,680 - Psest_0208 0.56 -1.1 208,680 - Psest_0208 0.56 +0.4 208,680 - Psest_0208 0.56 +0.0 208,680 - Psest_0208 0.56 -0.7 208,680 - Psest_0208 0.56 -1.5 208,859 + Psest_0208 0.67 +0.0 208,859 + Psest_0208 0.67 -0.6 208,860 - Psest_0208 0.67 -1.7 208,860 - Psest_0208 0.67 -1.6 208,860 - Psest_0208 0.67 -1.0 208,860 - Psest_0208 0.67 -0.4 209,054 + Psest_0208 0.80 -0.7 209,055 - Psest_0208 0.80 +1.0 209,114 + Psest_0208 0.84 -1.0 209,238 - -1.8 209,238 - -0.3 209,309 + +0.4 209,509 + Psest_0209 0.15 +0.6 209,899 + Psest_0209 0.53 -0.6
Or see this region's nucleotide sequence