Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14500

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
1,503,895	+		PGA1_c14480	0.13	+0.3
1,503,895	+		PGA1_c14480	0.13	+0.0
1,503,903	-		PGA1_c14480	0.15	-1.1
1,503,903	-		PGA1_c14480	0.15	-1.0
1,503,903	-		PGA1_c14480	0.15	-0.7
1,503,903	-		PGA1_c14480	0.15	-0.8
1,503,949	+		PGA1_c14480	0.23	+1.2
1,503,965	+		PGA1_c14480	0.26	-0.4
1,503,981	-		PGA1_c14480	0.30	-0.5
1,504,098	+		PGA1_c14480	0.52	-0.4
1,504,156	-		PGA1_c14480	0.63	-0.2
1,504,183	+		PGA1_c14480	0.68	+0.3
1,504,193	+		PGA1_c14480	0.70	+0.6
1,504,215	-		PGA1_c14480	0.74	+0.1
1,504,266	+		PGA1_c14480	0.84	+0.4
1,504,294	-		PGA1_c14480	0.89	+0.6
1,504,307	+				-0.6
1,504,332	+				-0.6
1,504,412	-				+0.3
1,504,498	+				+0.1
1,504,506	-				-0.2
1,504,506	-				-0.1
1,504,506	-				-1.8
1,504,533	+				-0.7
1,504,552	+				+0.1
1,504,632	+		PGA1_c14490	0.30	+0.2
1,504,677	-		PGA1_c14490	0.50	-1.0
1,504,698	+		PGA1_c14490	0.59	-0.7
1,504,717	-		PGA1_c14490	0.67	-1.4
1,504,985	-				-1.9
1,505,096	+		PGA1_c14500	0.15	-1.8
1,505,101	+		PGA1_c14500	0.15	-0.8
1,505,111	+		PGA1_c14500	0.16	-0.8
1,505,161	-		PGA1_c14500	0.19	+0.4
1,505,184	+		PGA1_c14500	0.21	-0.0
1,505,201	+		PGA1_c14500	0.22	-0.7
1,505,236	+		PGA1_c14500	0.25	-1.7
1,505,275	+		PGA1_c14500	0.27	-1.6
1,505,275	+		PGA1_c14500	0.27	-0.1
1,505,283	-		PGA1_c14500	0.28	-2.3
1,505,333	-		PGA1_c14500	0.32	-1.5
1,505,339	-		PGA1_c14500	0.32	-0.3
1,505,339	-		PGA1_c14500	0.32	-2.6
1,505,352	-		PGA1_c14500	0.33	+0.5
1,505,352	-		PGA1_c14500	0.33	-1.0
1,505,388	+		PGA1_c14500	0.35	-3.8
1,505,446	+		PGA1_c14500	0.40	-0.0
1,505,456	+		PGA1_c14500	0.40	-1.5
1,505,456	+		PGA1_c14500	0.40	-1.1
1,505,456	+		PGA1_c14500	0.40	-1.0
1,505,456	+		PGA1_c14500	0.40	-1.1
1,505,528	-		PGA1_c14500	0.45	-0.7
1,505,533	-		PGA1_c14500	0.46	-0.8
1,505,602	+		PGA1_c14500	0.51	-1.5
1,505,623	+		PGA1_c14500	0.52	-1.1
1,505,634	+		PGA1_c14500	0.53	-0.3
1,505,634	+		PGA1_c14500	0.53	-1.1
1,505,634	+		PGA1_c14500	0.53	-0.3
1,505,642	-		PGA1_c14500	0.53	-1.6
1,505,642	-		PGA1_c14500	0.53	-2.2
1,505,642	-		PGA1_c14500	0.53	-0.8
1,505,642	-		PGA1_c14500	0.53	-3.0
1,505,699	-		PGA1_c14500	0.57	-1.2
1,505,725	-		PGA1_c14500	0.59	-0.6
1,505,758	-		PGA1_c14500	0.62	-0.3
1,505,763	+		PGA1_c14500	0.62	-1.0
1,505,847	+		PGA1_c14500	0.68	-0.9
1,505,850	-		PGA1_c14500	0.68	-1.0
1,505,869	-		PGA1_c14500	0.69	+1.8
1,505,874	+		PGA1_c14500	0.70	-0.8
1,505,951	-		PGA1_c14500	0.75	-1.6
1,505,967	+		PGA1_c14500	0.76	-3.7
1,506,006	+		PGA1_c14500	0.79	-0.7
1,506,006	+		PGA1_c14500	0.79	-1.2
1,506,014	-		PGA1_c14500	0.80	-0.8
1,506,014	-		PGA1_c14500	0.80	-2.0
1,506,014	-		PGA1_c14500	0.80	-0.4
1,506,014	-		PGA1_c14500	0.80	-0.3
1,506,031	-		PGA1_c14500	0.81	-0.3
1,506,039	+		PGA1_c14500	0.81	-1.7
1,506,044	+		PGA1_c14500	0.82	-1.4
1,506,044	+		PGA1_c14500	0.82	-1.2
1,506,047	-		PGA1_c14500	0.82	+2.0
1,506,052	-		PGA1_c14500	0.82	-3.2
1,506,055	+		PGA1_c14500	0.83	-1.7
1,506,057	-		PGA1_c14500	0.83	-0.5
1,506,088	+		PGA1_c14500	0.85	-1.0
1,506,096	-		PGA1_c14500	0.85	-1.6
1,506,110	+		PGA1_c14500	0.86	-1.6
1,506,118	-		PGA1_c14500	0.87	-1.2
1,506,118	-		PGA1_c14500	0.87	-0.3
1,506,125	+		PGA1_c14500	0.88	-0.4
1,506,130	+		PGA1_c14500	0.88	-1.5
1,506,130	+		PGA1_c14500	0.88	-3.3
1,506,130	+		PGA1_c14500	0.88	-2.3
1,506,131	+		PGA1_c14500	0.88	-1.1
1,506,140	+		PGA1_c14500	0.89	-2.7
1,506,140	+		PGA1_c14500	0.89	+0.1
1,506,233	-				-1.6
1,506,366	+				-2.2
1,506,375	-				-0.6
1,506,375	-				+0.4