Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18410

Experiment: m.b. Nickel (II) chloride 0.625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 0.625 mM
1,919,824	-		PGA1_c18400	0.53	+0.2
1,919,843	+		PGA1_c18400	0.54	-0.2
1,919,868	+		PGA1_c18400	0.55	+0.3
1,919,898	+		PGA1_c18400	0.56	+0.3
1,919,925	+		PGA1_c18400	0.58	-1.3
1,919,941	-		PGA1_c18400	0.58	-0.5
1,919,946	-		PGA1_c18400	0.59	+0.1
1,919,946	-		PGA1_c18400	0.59	-0.3
1,920,011	+		PGA1_c18400	0.62	-0.7
1,920,021	+		PGA1_c18400	0.62	-0.0
1,920,021	+		PGA1_c18400	0.62	-0.8
1,920,029	-		PGA1_c18400	0.63	-0.4
1,920,029	-		PGA1_c18400	0.63	-0.7
1,920,029	-		PGA1_c18400	0.63	-1.2
1,920,035	+		PGA1_c18400	0.63	-0.6
1,920,069	-		PGA1_c18400	0.65	+0.5
1,920,089	+		PGA1_c18400	0.66	+0.3
1,920,168	+		PGA1_c18400	0.70	+0.8
1,920,178	+		PGA1_c18400	0.70	+0.6
1,920,202	+		PGA1_c18400	0.71	+0.5
1,920,205	-		PGA1_c18400	0.71	+1.0
1,920,260	+		PGA1_c18400	0.74	+0.9
1,920,260	+		PGA1_c18400	0.74	-1.9
1,920,263	-		PGA1_c18400	0.74	-1.1
1,920,263	-		PGA1_c18400	0.74	+0.2
1,920,263	-		PGA1_c18400	0.74	-0.9
1,920,268	-		PGA1_c18400	0.74	+0.1
1,920,268	-		PGA1_c18400	0.74	+0.3
1,920,280	-		PGA1_c18400	0.75	+0.1
1,920,323	-		PGA1_c18400	0.77	+1.1
1,920,324	+		PGA1_c18400	0.77	+0.3
1,920,372	-		PGA1_c18400	0.80	+1.3
1,920,452	+		PGA1_c18400	0.84	-0.5
1,920,457	+		PGA1_c18400	0.84	+0.3
1,920,509	+		PGA1_c18400	0.86	-0.7
1,920,511	+		PGA1_c18400	0.86	+0.9
1,920,577	-		PGA1_c18400	0.90	+1.8
1,920,577	-		PGA1_c18400	0.90	-0.4
1,920,577	-		PGA1_c18400	0.90	+0.2
1,920,651	-				+0.5
1,920,701	-				-0.7
1,920,718	+				+0.2
1,920,718	+				+0.8
1,920,721	-				-0.3
1,920,726	-				-0.4
1,920,726	-				+0.3
1,920,726	-				-0.5
1,920,728	+				+1.1
1,920,728	+				+0.2
1,920,728	+				+0.8
1,920,728	+				+1.0
1,920,728	+				+1.1
1,920,728	+				-0.2
1,920,728	+				+0.5
1,920,728	+				+0.0
1,920,728	+				-0.8
1,920,736	-				-0.3
1,920,736	-				-0.9
1,920,736	-				+0.1
1,920,736	-				+0.1
1,920,784	-				+1.0
1,920,785	-				-0.8
1,920,850	-				+1.2
1,920,850	-				+0.5
1,920,850	-				+0.4
1,920,850	-				-1.2
1,920,871	+				-0.8
1,920,888	-				-1.2
1,920,889	-				+0.2
1,920,889	-				-0.7
1,920,917	+				-0.1
1,921,000	-		PGA1_c18410	0.15	-0.5
1,921,011	-		PGA1_c18410	0.15	-1.2
1,921,049	+		PGA1_c18410	0.18	+0.2
1,921,052	-		PGA1_c18410	0.18	-0.8
1,921,160	-		PGA1_c18410	0.25	+0.5
1,921,259	+		PGA1_c18410	0.31	-0.6
1,921,274	+		PGA1_c18410	0.32	-0.3
1,921,274	+		PGA1_c18410	0.32	-0.9
1,921,284	-		PGA1_c18410	0.33	-1.0
1,921,297	+		PGA1_c18410	0.34	-0.1
1,921,309	+		PGA1_c18410	0.35	-0.8
1,921,309	+		PGA1_c18410	0.35	+1.4
1,921,314	+		PGA1_c18410	0.35	+0.3
1,921,322	-		PGA1_c18410	0.36	-0.4
1,921,328	-		PGA1_c18410	0.36	-1.4
1,921,357	+		PGA1_c18410	0.38	-0.9
1,921,364	+		PGA1_c18410	0.38	+1.0
1,921,383	+		PGA1_c18410	0.40	+0.2
1,921,388	+		PGA1_c18410	0.40	-0.6
1,921,428	+		PGA1_c18410	0.43	+1.2
1,921,431	+		PGA1_c18410	0.43	-1.8
1,921,443	+		PGA1_c18410	0.44	+0.4
1,921,449	+		PGA1_c18410	0.44	-1.2
1,921,457	+		PGA1_c18410	0.44	+0.4
1,921,465	-		PGA1_c18410	0.45	+0.8
1,921,507	-		PGA1_c18410	0.48	+0.0
1,921,509	+		PGA1_c18410	0.48	-1.6
1,921,549	+		PGA1_c18410	0.50	-0.8
1,921,549	+		PGA1_c18410	0.50	+1.1
1,921,549	+		PGA1_c18410	0.50	+0.8
1,921,549	+		PGA1_c18410	0.50	+0.4
1,921,557	-		PGA1_c18410	0.51	+0.4
1,921,557	-		PGA1_c18410	0.51	+0.7
1,921,557	-		PGA1_c18410	0.51	+0.3
1,921,557	-		PGA1_c18410	0.51	-0.6
1,921,557	-		PGA1_c18410	0.51	-1.8
1,921,584	-		PGA1_c18410	0.53	-1.1
1,921,612	+		PGA1_c18410	0.55	-1.3
1,921,615	-		PGA1_c18410	0.55	+0.1
1,921,634	+		PGA1_c18410	0.56	-1.2
1,921,673	-		PGA1_c18410	0.59	-1.7
1,921,675	+		PGA1_c18410	0.59	-1.8
1,921,730	-		PGA1_c18410	0.62	+0.0
1,921,760	+		PGA1_c18410	0.64	+0.8
1,921,852	+		PGA1_c18410	0.70	-1.3
1,921,891	+		PGA1_c18410	0.73	-0.1
1,921,906	+		PGA1_c18410	0.74	-2.0
1,921,924	-		PGA1_c18410	0.75	-0.2
1,921,961	+		PGA1_c18410	0.77	+0.3
1,921,961	+		PGA1_c18410	0.77	-0.1
1,921,969	-		PGA1_c18410	0.78	+0.2
1,921,984	+		PGA1_c18410	0.79	+1.4
1,921,987	-		PGA1_c18410	0.79	-0.7
1,922,029	+		PGA1_c18410	0.82	-2.6
1,922,045	+		PGA1_c18410	0.83	+1.2
1,922,047	-		PGA1_c18410	0.83	-1.3
1,922,068	-		PGA1_c18410	0.84	+0.9
1,922,068	-		PGA1_c18410	0.84	+0.1
1,922,119	+		PGA1_c18410	0.88	+0.7
1,922,151	-		PGA1_c18410	0.90	-0.1
1,922,165	-				-1.0
1,922,165	-				+1.1
1,922,165	-				-0.4
1,922,295	+				+0.1
1,922,325	+				-0.2
1,922,333	-				-0.3
1,922,384	+				-1.3
1,922,390	-				-0.4
1,922,432	+		PGA1_c18420	0.12	+1.7
1,922,520	+		PGA1_c18420	0.28	+0.2
1,922,530	+		PGA1_c18420	0.30	+0.4
1,922,549	-		PGA1_c18420	0.34	-0.8
1,922,592	-		PGA1_c18420	0.42	+0.4
1,922,600	+		PGA1_c18420	0.43	+0.0
1,922,600	-		PGA1_c18420	0.43	+1.5
1,922,648	+		PGA1_c18420	0.52	-0.3
1,922,648	+		PGA1_c18420	0.52	-1.7
1,922,656	-		PGA1_c18420	0.54	+0.3
1,922,663	+		PGA1_c18420	0.55	-0.8
1,922,671	-		PGA1_c18420	0.57	+0.0
1,922,671	-		PGA1_c18420	0.57	-0.3
1,922,672	-		PGA1_c18420	0.57	+0.6
1,922,695	-		PGA1_c18420	0.61	+0.9
1,922,695	-		PGA1_c18420	0.61	-1.5
1,922,805	-		PGA1_c18420	0.82	+0.6
1,922,805	-		PGA1_c18420	0.82	-0.4
1,922,820	+		PGA1_c18420	0.85	+0.1
1,922,830	+		PGA1_c18420	0.87	-1.1
1,922,838	-		PGA1_c18420	0.88	+0.0
1,922,843	+		PGA1_c18420	0.89	+0.1
1,922,852	-				+0.4
1,922,867	+				-0.8
1,922,869	-				-0.2
1,922,912	+				-0.8
1,922,912	+				-1.0
1,922,912	+				+0.8
1,922,912	+				+0.2
1,922,920	-				-1.0
1,922,920	-				-1.2
1,922,920	-				-0.3
1,923,029	-				+0.9
1,923,042	+				-0.1
1,923,042	+				+1.2
1,923,057	+				-0.2
1,923,124	+		PGA1_c18430	0.11	-1.2
1,923,157	-		PGA1_c18430	0.13	+0.9
1,923,158	+		PGA1_c18430	0.13	+0.1
1,923,278	+		PGA1_c18430	0.19	+0.3