Experiment: m.b. Cobalt chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c01530 and PGA1_c01540 are separated by 249 nucleotides PGA1_c01540 and PGA1_c01550 are separated by 17 nucleotides PGA1_c01550 and PGA1_c01560 overlap by 4 nucleotides PGA1_c01560 and PGA1_c01570 overlap by 4 nucleotides
PGA1_c01530: PGA1_c01530 - hypothetical protein, at 150,193 to 151,368
_c01530
PGA1_c01540: PGA1_c01540 - 30S ribosomal protein S10, at 151,618 to 151,938
_c01540
PGA1_c01550: PGA1_c01550 - 50S ribosomal protein L3, at 151,956 to 152,669
_c01550
PGA1_c01560: PGA1_c01560 - 50S ribosomal protein L4, at 152,666 to 153,283
_c01560
PGA1_c01570: PGA1_c01570 - 50S ribosomal protein L23, at 153,280 to 153,576
_c01570
Position (kb) 151
152
153 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 150.956 kb on + strand, within PGA1_c01530 at 150.956 kb on + strand, within PGA1_c01530 at 150.956 kb on + strand, within PGA1_c01530 at 150.956 kb on + strand, within PGA1_c01530 at 150.956 kb on + strand, within PGA1_c01530 at 150.956 kb on + strand, within PGA1_c01530 at 150.964 kb on - strand, within PGA1_c01530 at 150.971 kb on - strand, within PGA1_c01530 at 150.986 kb on - strand, within PGA1_c01530 at 150.990 kb on + strand, within PGA1_c01530 at 150.990 kb on + strand, within PGA1_c01530 at 150.998 kb on - strand, within PGA1_c01530 at 151.027 kb on + strand, within PGA1_c01530 at 151.027 kb on + strand, within PGA1_c01530 at 151.032 kb on + strand, within PGA1_c01530 at 151.032 kb on + strand, within PGA1_c01530 at 151.032 kb on + strand, within PGA1_c01530 at 151.032 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.037 kb on + strand, within PGA1_c01530 at 151.040 kb on - strand, within PGA1_c01530 at 151.040 kb on - strand, within PGA1_c01530 at 151.040 kb on - strand, within PGA1_c01530 at 151.040 kb on - strand, within PGA1_c01530 at 151.040 kb on - strand, within PGA1_c01530 at 151.040 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.045 kb on - strand, within PGA1_c01530 at 151.050 kb on - strand, within PGA1_c01530 at 151.053 kb on - strand, within PGA1_c01530 at 151.063 kb on + strand, within PGA1_c01530 at 151.071 kb on - strand, within PGA1_c01530 at 151.076 kb on - strand, within PGA1_c01530 at 151.076 kb on - strand, within PGA1_c01530 at 151.088 kb on - strand, within PGA1_c01530 at 151.090 kb on + strand, within PGA1_c01530 at 151.103 kb on + strand, within PGA1_c01530 at 151.103 kb on + strand, within PGA1_c01530 at 151.106 kb on + strand, within PGA1_c01530 at 151.111 kb on - strand, within PGA1_c01530 at 151.111 kb on - strand, within PGA1_c01530 at 151.114 kb on - strand, within PGA1_c01530 at 151.124 kb on - strand, within PGA1_c01530 at 151.134 kb on - strand, within PGA1_c01530 at 151.138 kb on + strand, within PGA1_c01530 at 151.158 kb on - strand, within PGA1_c01530 at 151.159 kb on + strand, within PGA1_c01530 at 151.184 kb on + strand, within PGA1_c01530 at 151.193 kb on + strand, within PGA1_c01530 at 151.197 kb on + strand, within PGA1_c01530 at 151.207 kb on + strand, within PGA1_c01530 at 151.219 kb on + strand, within PGA1_c01530 at 151.219 kb on + strand, within PGA1_c01530 at 151.219 kb on + strand, within PGA1_c01530 at 151.219 kb on + strand, within PGA1_c01530 at 151.227 kb on - strand, within PGA1_c01530 at 151.227 kb on - strand, within PGA1_c01530 at 151.227 kb on - strand, within PGA1_c01530 at 151.227 kb on - strand, within PGA1_c01530 at 151.264 kb on - strand at 151.264 kb on - strand at 151.270 kb on + strand at 151.280 kb on + strand at 151.281 kb on + strand at 151.283 kb on - strand at 151.288 kb on - strand at 151.288 kb on - strand at 151.291 kb on + strand at 151.298 kb on - strand at 151.313 kb on + strand at 151.327 kb on + strand at 151.327 kb on - strand at 151.327 kb on - strand at 151.335 kb on - strand at 151.335 kb on - strand at 151.353 kb on - strand at 151.368 kb on + strand at 151.368 kb on + strand at 151.373 kb on + strand at 151.373 kb on + strand at 151.373 kb on + strand at 151.373 kb on + strand at 151.373 kb on + strand at 151.376 kb on - strand at 151.376 kb on - strand at 151.381 kb on - strand at 151.381 kb on - strand at 151.389 kb on - strand at 151.395 kb on + strand at 151.399 kb on - strand at 151.403 kb on - strand at 151.412 kb on - strand at 151.416 kb on - strand at 151.434 kb on + strand at 151.435 kb on - strand at 151.435 kb on - strand at 151.442 kb on - strand at 151.465 kb on + strand at 151.473 kb on - strand at 153.645 kb on + strand at 153.645 kb on - strand at 153.653 kb on - strand at 153.653 kb on - strand at 153.656 kb on + strand at 153.656 kb on + strand at 153.656 kb on + strand at 153.656 kb on + strand at 153.656 kb on + strand at 153.661 kb on + strand at 153.661 kb on + strand at 153.663 kb on + strand at 153.663 kb on + strand at 153.663 kb on + strand at 153.663 kb on + strand at 153.666 kb on + strand at 153.669 kb on - strand at 153.669 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.625 mM remove 150,956 + PGA1_c01530 0.65 +0.6 150,956 + PGA1_c01530 0.65 +1.7 150,956 + PGA1_c01530 0.65 +0.9 150,956 + PGA1_c01530 0.65 +0.9 150,956 + PGA1_c01530 0.65 +1.1 150,956 + PGA1_c01530 0.65 +0.7 150,964 - PGA1_c01530 0.66 +0.8 150,971 - PGA1_c01530 0.66 +0.2 150,986 - PGA1_c01530 0.67 +0.8 150,990 + PGA1_c01530 0.68 +0.2 150,990 + PGA1_c01530 0.68 +0.9 150,998 - PGA1_c01530 0.68 -0.5 151,027 + PGA1_c01530 0.71 -0.1 151,027 + PGA1_c01530 0.71 -0.3 151,032 + PGA1_c01530 0.71 -1.7 151,032 + PGA1_c01530 0.71 +0.3 151,032 + PGA1_c01530 0.71 -0.1 151,032 + PGA1_c01530 0.71 +1.4 151,037 + PGA1_c01530 0.72 +0.2 151,037 + PGA1_c01530 0.72 +1.5 151,037 + PGA1_c01530 0.72 +0.6 151,037 + PGA1_c01530 0.72 +1.9 151,037 + PGA1_c01530 0.72 -0.2 151,037 + PGA1_c01530 0.72 +0.3 151,037 + PGA1_c01530 0.72 -0.2 151,037 + PGA1_c01530 0.72 +0.5 151,037 + PGA1_c01530 0.72 +0.7 151,037 + PGA1_c01530 0.72 -1.5 151,037 + PGA1_c01530 0.72 -0.4 151,037 + PGA1_c01530 0.72 +0.5 151,037 + PGA1_c01530 0.72 +0.9 151,037 + PGA1_c01530 0.72 +1.1 151,037 + PGA1_c01530 0.72 +0.2 151,037 + PGA1_c01530 0.72 +0.9 151,037 + PGA1_c01530 0.72 -0.8 151,037 + PGA1_c01530 0.72 +1.4 151,037 + PGA1_c01530 0.72 +1.0 151,037 + PGA1_c01530 0.72 -0.7 151,037 + PGA1_c01530 0.72 +1.1 151,037 + PGA1_c01530 0.72 -1.2 151,037 + PGA1_c01530 0.72 +1.1 151,037 + PGA1_c01530 0.72 +1.3 151,037 + PGA1_c01530 0.72 +2.0 151,037 + PGA1_c01530 0.72 +1.1 151,037 + PGA1_c01530 0.72 +0.4 151,037 + PGA1_c01530 0.72 +0.5 151,037 + PGA1_c01530 0.72 +0.5 151,037 + PGA1_c01530 0.72 -1.6 151,037 + PGA1_c01530 0.72 +1.9 151,037 + PGA1_c01530 0.72 +1.3 151,037 + PGA1_c01530 0.72 +1.4 151,037 + PGA1_c01530 0.72 -2.2 151,037 + PGA1_c01530 0.72 +0.2 151,037 + PGA1_c01530 0.72 +0.4 151,037 + PGA1_c01530 0.72 +0.5 151,037 + PGA1_c01530 0.72 +3.6 151,037 + PGA1_c01530 0.72 +0.5 151,037 + PGA1_c01530 0.72 +0.7 151,037 + PGA1_c01530 0.72 +0.5 151,037 + PGA1_c01530 0.72 -0.9 151,037 + PGA1_c01530 0.72 +0.8 151,037 + PGA1_c01530 0.72 -1.4 151,037 + PGA1_c01530 0.72 -0.2 151,037 + PGA1_c01530 0.72 +0.4 151,037 + PGA1_c01530 0.72 +0.3 151,037 + PGA1_c01530 0.72 -0.8 151,037 + PGA1_c01530 0.72 -0.3 151,037 + PGA1_c01530 0.72 +0.4 151,037 + PGA1_c01530 0.72 +1.1 151,040 - PGA1_c01530 0.72 +0.7 151,040 - PGA1_c01530 0.72 +1.0 151,040 - PGA1_c01530 0.72 -0.5 151,040 - PGA1_c01530 0.72 +0.6 151,040 - PGA1_c01530 0.72 -1.3 151,040 - PGA1_c01530 0.72 -0.4 151,045 - PGA1_c01530 0.72 +1.2 151,045 - PGA1_c01530 0.72 -0.2 151,045 - PGA1_c01530 0.72 -0.3 151,045 - PGA1_c01530 0.72 +0.7 151,045 - PGA1_c01530 0.72 +0.6 151,045 - PGA1_c01530 0.72 +0.9 151,045 - PGA1_c01530 0.72 +0.8 151,045 - PGA1_c01530 0.72 +0.3 151,045 - PGA1_c01530 0.72 -0.2 151,045 - PGA1_c01530 0.72 -0.4 151,045 - PGA1_c01530 0.72 +2.1 151,045 - PGA1_c01530 0.72 -0.3 151,045 - PGA1_c01530 0.72 +0.8 151,045 - PGA1_c01530 0.72 -0.9 151,045 - PGA1_c01530 0.72 +0.9 151,045 - PGA1_c01530 0.72 -3.4 151,045 - PGA1_c01530 0.72 +1.5 151,045 - PGA1_c01530 0.72 +1.0 151,045 - PGA1_c01530 0.72 -0.5 151,045 - PGA1_c01530 0.72 -1.3 151,045 - PGA1_c01530 0.72 +0.2 151,045 - PGA1_c01530 0.72 +1.0 151,045 - PGA1_c01530 0.72 -1.1 151,045 - PGA1_c01530 0.72 +0.3 151,045 - PGA1_c01530 0.72 +0.8 151,045 - PGA1_c01530 0.72 +0.2 151,045 - PGA1_c01530 0.72 +1.2 151,045 - PGA1_c01530 0.72 +1.1 151,045 - PGA1_c01530 0.72 +0.5 151,045 - PGA1_c01530 0.72 +0.1 151,045 - PGA1_c01530 0.72 +1.2 151,045 - PGA1_c01530 0.72 +0.1 151,045 - PGA1_c01530 0.72 +0.4 151,045 - PGA1_c01530 0.72 -0.7 151,045 - PGA1_c01530 0.72 +1.1 151,045 - PGA1_c01530 0.72 +0.1 151,045 - PGA1_c01530 0.72 +1.0 151,045 - PGA1_c01530 0.72 -0.4 151,045 - PGA1_c01530 0.72 -1.5 151,050 - PGA1_c01530 0.73 -0.1 151,053 - PGA1_c01530 0.73 +0.5 151,063 + PGA1_c01530 0.74 -0.1 151,071 - PGA1_c01530 0.75 +0.3 151,076 - PGA1_c01530 0.75 -0.9 151,076 - PGA1_c01530 0.75 +0.1 151,088 - PGA1_c01530 0.76 -0.8 151,090 + PGA1_c01530 0.76 +0.6 151,103 + PGA1_c01530 0.77 +0.9 151,103 + PGA1_c01530 0.77 +0.3 151,106 + PGA1_c01530 0.78 -0.8 151,111 - PGA1_c01530 0.78 -0.5 151,111 - PGA1_c01530 0.78 +0.8 151,114 - PGA1_c01530 0.78 -0.0 151,124 - PGA1_c01530 0.79 +1.3 151,134 - PGA1_c01530 0.80 +1.8 151,138 + PGA1_c01530 0.80 +0.4 151,158 - PGA1_c01530 0.82 +0.3 151,159 + PGA1_c01530 0.82 +0.5 151,184 + PGA1_c01530 0.84 +0.9 151,193 + PGA1_c01530 0.85 +1.1 151,197 + PGA1_c01530 0.85 -0.9 151,207 + PGA1_c01530 0.86 +2.0 151,219 + PGA1_c01530 0.87 -0.3 151,219 + PGA1_c01530 0.87 -0.1 151,219 + PGA1_c01530 0.87 +1.0 151,219 + PGA1_c01530 0.87 +1.8 151,227 - PGA1_c01530 0.88 -0.4 151,227 - PGA1_c01530 0.88 -1.1 151,227 - PGA1_c01530 0.88 +0.9 151,227 - PGA1_c01530 0.88 -0.9 151,264 - -1.0 151,264 - -0.6 151,270 + +0.1 151,280 + +1.0 151,281 + +1.3 151,283 - +0.4 151,288 - +0.9 151,288 - +0.2 151,291 + -0.2 151,298 - +0.7 151,313 + +0.4 151,327 + +0.2 151,327 - +0.8 151,327 - -1.6 151,335 - -0.3 151,335 - -2.3 151,353 - +0.1 151,368 + +1.7 151,368 + +0.4 151,373 + -0.4 151,373 + +0.8 151,373 + +1.1 151,373 + +0.4 151,373 + +0.5 151,376 - +1.1 151,376 - +0.1 151,381 - +0.5 151,381 - +0.1 151,389 - +1.2 151,395 + +0.8 151,399 - +0.3 151,403 - +0.4 151,412 - -0.2 151,416 - +0.8 151,434 + +0.6 151,435 - +0.4 151,435 - +0.1 151,442 - +0.7 151,465 + +0.7 151,473 - -0.8 153,645 + +0.8 153,645 - +1.1 153,653 - -0.0 153,653 - +1.3 153,656 + +0.5 153,656 + -1.6 153,656 + +1.4 153,656 + -0.6 153,656 + +0.6 153,661 + +1.6 153,661 + +0.8 153,663 + +0.0 153,663 + +1.5 153,663 + +2.2 153,663 + +0.4 153,666 + +1.2 153,669 - +0.2 153,669 - +0.6
Or see this region's nucleotide sequence