Experiment: Lomefloxacin 0.0002 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO_0893 and SO0894 are separated by 413 nucleotides SO0894 and SO0895 are separated by 576 nucleotides
SO_0893: SO_0893 - no description, at 921,324 to 922,547
_0893
SO0894: SO0894 - hypothetical protein (NCBI ptt file), at 922,961 to 923,062
SO0894
SO0895: SO0895 - pirin family protein (NCBI ptt file), at 923,639 to 924,496
SO0895
Position (kb) 922
923
924 Strain fitness (log2 ratio) -1
0
1 at 922.814 kb on - strand at 922.814 kb on - strand at 922.840 kb on - strand at 922.850 kb on - strand at 922.860 kb on - strand at 922.860 kb on - strand at 922.874 kb on + strand at 923.069 kb on + strand at 923.069 kb on + strand at 923.072 kb on - strand at 923.077 kb on - strand at 923.206 kb on - strand at 923.214 kb on - strand at 923.247 kb on + strand at 923.277 kb on + strand at 923.277 kb on + strand at 923.285 kb on - strand at 923.285 kb on - strand at 923.287 kb on + strand at 923.290 kb on + strand at 923.292 kb on + strand at 923.303 kb on - strand at 923.315 kb on + strand at 923.609 kb on + strand at 923.609 kb on + strand at 923.609 kb on + strand at 923.609 kb on + strand at 923.609 kb on + strand at 923.609 kb on + strand at 923.609 kb on + strand at 923.610 kb on + strand at 923.617 kb on - strand at 923.617 kb on - strand at 923.617 kb on - strand at 923.617 kb on - strand at 923.617 kb on - strand at 923.617 kb on - strand at 923.728 kb on + strand, within SO0895 at 923.830 kb on - strand, within SO0895 at 923.831 kb on - strand, within SO0895 at 923.847 kb on + strand, within SO0895 at 923.847 kb on + strand, within SO0895 at 923.847 kb on + strand, within SO0895 at 923.847 kb on + strand, within SO0895 at 923.855 kb on - strand, within SO0895 at 923.959 kb on + strand, within SO0895 at 924.049 kb on - strand, within SO0895
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.0002 mM remove 922,814 - -0.1 922,814 - +0.1 922,840 - +0.4 922,850 - +0.1 922,860 - -0.2 922,860 - -1.0 922,874 + -0.4 923,069 + -0.7 923,069 + +0.5 923,072 - -0.1 923,077 - -0.4 923,206 - -0.4 923,214 - -0.1 923,247 + -0.2 923,277 + -1.0 923,277 + -0.5 923,285 - -0.1 923,285 - -0.4 923,287 + -0.4 923,290 + -0.5 923,292 + -1.5 923,303 - +0.6 923,315 + -0.4 923,609 + +1.4 923,609 + -0.1 923,609 + +0.1 923,609 + -0.1 923,609 + -0.1 923,609 + -1.2 923,609 + +0.6 923,610 + -0.5 923,617 - +0.4 923,617 - +0.9 923,617 - -0.0 923,617 - -0.4 923,617 - -0.0 923,617 - -1.2 923,728 + SO0895 0.10 -0.5 923,830 - SO0895 0.22 +0.6 923,831 - SO0895 0.22 +1.0 923,847 + SO0895 0.24 +1.2 923,847 + SO0895 0.24 -0.0 923,847 + SO0895 0.24 -0.7 923,847 + SO0895 0.24 +0.1 923,855 - SO0895 0.25 +0.5 923,959 + SO0895 0.37 +0.0 924,049 - SO0895 0.48 +0.0
Or see this region's nucleotide sequence