Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36370

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
3,803,941	-		PGA1_c36360	0.35	+1.0
3,803,955	+		PGA1_c36360	0.36	-0.5
3,803,964	+		PGA1_c36360	0.36	+1.6
3,803,964	+		PGA1_c36360	0.36	-0.9
3,803,972	-		PGA1_c36360	0.37	-1.8
3,803,987	-		PGA1_c36360	0.38	+0.7
3,804,017	+		PGA1_c36360	0.40	-0.5
3,804,018	-		PGA1_c36360	0.40	+0.0
3,804,045	-		PGA1_c36360	0.42	-0.6
3,804,071	+		PGA1_c36360	0.44	-0.5
3,804,071	+		PGA1_c36360	0.44	+0.3
3,804,087	+		PGA1_c36360	0.45	+0.2
3,804,133	+		PGA1_c36360	0.49	-0.6
3,804,153	+		PGA1_c36360	0.50	+0.5
3,804,222	+		PGA1_c36360	0.55	+0.8
3,804,222	+		PGA1_c36360	0.55	-0.9
3,804,222	+		PGA1_c36360	0.55	+0.2
3,804,222	+		PGA1_c36360	0.55	-0.9
3,804,230	-		PGA1_c36360	0.56	-0.2
3,804,230	-		PGA1_c36360	0.56	+0.1
3,804,230	-		PGA1_c36360	0.56	+1.1
3,804,230	-		PGA1_c36360	0.56	+0.4
3,804,230	-		PGA1_c36360	0.56	-1.2
3,804,230	-		PGA1_c36360	0.56	+0.2
3,804,230	-		PGA1_c36360	0.56	-0.7
3,804,230	-		PGA1_c36360	0.56	+0.1
3,804,230	-		PGA1_c36360	0.56	+1.0
3,804,230	-		PGA1_c36360	0.56	-0.2
3,804,234	+		PGA1_c36360	0.56	-0.2
3,804,242	-		PGA1_c36360	0.57	-1.8
3,804,269	+		PGA1_c36360	0.59	-0.3
3,804,308	-		PGA1_c36360	0.62	+0.5
3,804,309	-		PGA1_c36360	0.62	-0.6
3,804,309	-		PGA1_c36360	0.62	+1.3
3,804,322	+		PGA1_c36360	0.63	+0.7
3,804,374	+		PGA1_c36360	0.66	+0.4
3,804,395	+		PGA1_c36360	0.68	-0.4
3,804,410	+		PGA1_c36360	0.69	+0.4
3,804,417	-		PGA1_c36360	0.70	+0.3
3,804,451	+		PGA1_c36360	0.72	-1.9
3,804,451	+		PGA1_c36360	0.72	-0.9
3,804,505	+		PGA1_c36360	0.76	-2.8
3,804,505	+		PGA1_c36360	0.76	-1.3
3,804,505	+		PGA1_c36360	0.76	+1.0
3,804,576	+		PGA1_c36360	0.81	+0.9
3,804,584	-		PGA1_c36360	0.82	+0.8
3,804,599	+		PGA1_c36360	0.83	+0.9
3,804,646	+		PGA1_c36360	0.86	+0.4
3,804,648	+		PGA1_c36360	0.86	+1.8
3,804,648	-		PGA1_c36360	0.86	+1.4
3,804,648	-		PGA1_c36360	0.86	-0.2
3,804,654	-		PGA1_c36360	0.87	+0.4
3,804,656	-		PGA1_c36360	0.87	-0.7
3,804,799	+				-1.5
3,804,807	-				+1.2
3,804,836	+				+0.8
3,804,869	-				-1.4
3,804,874	+				-0.2
3,804,889	+				+0.7
3,804,934	-				+0.8
3,804,941	+		PGA1_c36370	0.10	-0.7
3,804,941	+		PGA1_c36370	0.10	-3.6
3,804,972	+		PGA1_c36370	0.14	+0.1
3,804,973	+		PGA1_c36370	0.15	-0.7
3,804,980	-		PGA1_c36370	0.16	-0.5
3,804,992	-		PGA1_c36370	0.17	-1.9
3,804,992	-		PGA1_c36370	0.17	-2.5
3,805,062	+		PGA1_c36370	0.27	-0.3
3,805,074	+		PGA1_c36370	0.28	-0.8
3,805,089	-		PGA1_c36370	0.30	-1.2
3,805,120	+		PGA1_c36370	0.34	-0.4
3,805,120	-		PGA1_c36370	0.34	-0.3
3,805,128	-		PGA1_c36370	0.35	-0.4
3,805,128	-		PGA1_c36370	0.35	-1.0
3,805,161	-		PGA1_c36370	0.40	+0.3
3,805,161	-		PGA1_c36370	0.40	-2.7
3,805,271	+		PGA1_c36370	0.55	-2.9
3,805,271	+		PGA1_c36370	0.55	-1.8
3,805,271	+		PGA1_c36370	0.55	+1.0
3,805,271	+		PGA1_c36370	0.55	-0.4
3,805,279	-		PGA1_c36370	0.56	-0.8
3,805,279	-		PGA1_c36370	0.56	-0.9
3,805,279	-		PGA1_c36370	0.56	+0.5
3,805,279	-		PGA1_c36370	0.56	-0.4
3,805,296	+		PGA1_c36370	0.58	-2.2
3,805,296	+		PGA1_c36370	0.58	-2.9
3,805,299	-		PGA1_c36370	0.59	-0.6
3,805,359	-		PGA1_c36370	0.67	-0.6
3,805,359	-		PGA1_c36370	0.67	-1.3
3,805,359	-		PGA1_c36370	0.67	+0.2
3,805,361	+		PGA1_c36370	0.67	-0.2
3,805,361	+		PGA1_c36370	0.67	-1.1
3,805,361	+		PGA1_c36370	0.67	+0.2
3,805,361	+		PGA1_c36370	0.67	-2.2
3,805,369	-		PGA1_c36370	0.68	-0.5
3,805,369	-		PGA1_c36370	0.68	-0.6
3,805,369	-		PGA1_c36370	0.68	+1.2
3,805,369	-		PGA1_c36370	0.68	+0.8
3,805,450	-		PGA1_c36370	0.79	-1.3
3,805,634	+				+0.2
3,805,644	+				-0.7
3,805,662	+				+0.6
3,805,666	+				+0.1
3,805,707	+				-1.5
3,805,707	+				+0.6
3,805,716	-		PGA1_c36380	0.11	+1.4
3,805,716	-		PGA1_c36380	0.11	-2.5
3,805,720	+		PGA1_c36380	0.12	-0.3
3,805,723	-		PGA1_c36380	0.13	+0.7
3,805,723	-		PGA1_c36380	0.13	-0.3
3,805,809	+		PGA1_c36380	0.38	+0.8
3,805,809	+		PGA1_c36380	0.38	+0.6
3,805,809	+		PGA1_c36380	0.38	-0.1
3,805,809	+		PGA1_c36380	0.38	+0.6
3,805,809	+		PGA1_c36380	0.38	+0.4
3,805,812	-		PGA1_c36380	0.39	-0.8
3,805,817	-		PGA1_c36380	0.40	-0.6
3,805,817	-		PGA1_c36380	0.40	+0.2
3,805,848	+		PGA1_c36380	0.49	+0.1
3,805,848	+		PGA1_c36380	0.49	+0.4
3,805,856	-		PGA1_c36380	0.51	-0.4
3,805,856	-		PGA1_c36380	0.51	-2.2
3,805,877	+		PGA1_c36380	0.57	-1.8
3,805,904	-		PGA1_c36380	0.65	+1.2
3,805,909	+		PGA1_c36380	0.66	+1.0
3,805,937	+		PGA1_c36380	0.74	-2.6
3,806,014	+				-0.9
3,806,017	-				+0.3
3,806,032	-				+0.8
3,806,070	-				-1.6
3,806,073	+				+0.9
3,806,094	+				-1.4
3,806,099	+				-1.8
3,806,099	+				+0.9
3,806,102	-				+0.6
3,806,102	-				-0.3
3,806,181	+				-0.3
3,806,324	+		PGA1_c36390	0.21	-0.6
3,806,326	-		PGA1_c36390	0.21	-0.2
3,806,326	-		PGA1_c36390	0.21	-0.6
3,806,357	-		PGA1_c36390	0.24	-1.0
3,806,369	-		PGA1_c36390	0.25	-3.0
3,806,399	+		PGA1_c36390	0.28	-1.0
3,806,399	+		PGA1_c36390	0.28	+0.1
3,806,407	-		PGA1_c36390	0.29	-0.7
3,806,603	+		PGA1_c36390	0.47	-0.2