Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35400

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
3,712,090	-		PGA1_c35380	0.63	-0.8
3,712,175	+		PGA1_c35380	0.77	-0.5
3,712,311	+				+0.5
3,712,328	+				+0.5
3,712,336	-				-0.2
3,712,363	+				+0.0
3,712,378	+				-3.2
3,712,422	+				-2.7
3,712,422	+				+2.4
3,712,422	-				+0.4
3,712,422	-				+0.1
3,712,439	+				+0.3
3,712,809	+		PGA1_c35390	0.74	-0.1
3,712,943	+				-0.2
3,712,954	+				+0.7
3,712,954	+				+0.9
3,712,962	-				-2.5
3,712,962	-				-1.8
3,712,962	-				-0.5
3,712,962	-				-1.4
3,712,965	+				+0.5
3,712,965	+				-1.1
3,712,968	-				+1.0
3,712,973	-				+0.4
3,712,973	-				-2.1
3,712,973	-				+0.0
3,712,973	-				-1.3
3,712,973	-				+0.5
3,712,995	+				+0.9
3,712,995	+				+0.3
3,712,995	+				+1.4
3,712,995	+				+0.6
3,712,995	+				+0.3
3,712,995	+				-0.8
3,713,003	-				-0.6
3,713,003	-				+0.1
3,713,013	-				-0.7
3,713,013	-				-2.2
3,713,039	-				+0.3
3,713,039	-				-0.1
3,713,060	+		PGA1_c35400	0.11	-2.0
3,713,090	+		PGA1_c35400	0.16	+0.4
3,713,154	+		PGA1_c35400	0.26	-0.7
3,713,161	+		PGA1_c35400	0.27	-1.9
3,713,162	-		PGA1_c35400	0.28	-0.0
3,713,162	-		PGA1_c35400	0.28	-1.0
3,713,184	+		PGA1_c35400	0.31	-0.8
3,713,192	-		PGA1_c35400	0.33	-1.6
3,713,213	-		PGA1_c35400	0.36	-2.1
3,713,213	-		PGA1_c35400	0.36	-0.2
3,713,213	-		PGA1_c35400	0.36	-1.8
3,713,213	-		PGA1_c35400	0.36	-1.9
3,713,215	+		PGA1_c35400	0.37	-0.2
3,713,215	+		PGA1_c35400	0.37	+0.3
3,713,217	+		PGA1_c35400	0.37	+0.4
3,713,217	+		PGA1_c35400	0.37	+0.4
3,713,217	+		PGA1_c35400	0.37	-2.3
3,713,218	-		PGA1_c35400	0.37	-0.8
3,713,227	+		PGA1_c35400	0.39	-1.1
3,713,227	+		PGA1_c35400	0.39	-1.6
3,713,227	+		PGA1_c35400	0.39	-2.3
3,713,235	-		PGA1_c35400	0.40	-3.0
3,713,236	-		PGA1_c35400	0.40	-1.3
3,713,263	+		PGA1_c35400	0.45	-0.3
3,713,274	+		PGA1_c35400	0.46	-1.8
3,713,278	+		PGA1_c35400	0.47	+0.5
3,713,340	+		PGA1_c35400	0.57	-3.0
3,713,348	-		PGA1_c35400	0.59	-2.5
3,713,348	-		PGA1_c35400	0.59	-0.6
3,713,382	+		PGA1_c35400	0.64	-0.6
3,713,390	-		PGA1_c35400	0.66	-0.3
3,713,461	-		PGA1_c35400	0.78	-1.8
3,713,480	+		PGA1_c35400	0.81	-1.7
3,713,480	+		PGA1_c35400	0.81	-0.6
3,713,536	+				+0.1
3,713,580	+				-1.4
3,713,588	-				-3.7
3,713,633	+				-1.0
3,713,641	-				+0.6
3,713,657	+				-2.6
3,713,676	+				+1.4
3,713,676	+				+0.9
3,713,676	+				+0.1
3,713,676	+				+0.9
3,713,676	+				+0.9
3,713,684	-				+0.4
3,713,684	-				-0.5
3,713,721	-				+0.8
3,713,722	+				+0.4
3,713,732	+				-0.0
3,713,744	+				+2.0
3,713,816	+				-1.2
3,714,002	-		PGA1_c35410	0.43	+1.2
3,714,079	-		PGA1_c35410	0.68	+1.4
3,714,107	+		PGA1_c35410	0.77	-1.4
3,714,107	+		PGA1_c35410	0.77	-1.5
3,714,107	+		PGA1_c35410	0.77	-3.5
3,714,107	+		PGA1_c35410	0.77	+1.9
3,714,115	-		PGA1_c35410	0.79	+0.6
3,714,115	-		PGA1_c35410	0.79	-0.6
3,714,115	-		PGA1_c35410	0.79	-2.3
3,714,160	-				+0.8
3,714,168	-				+0.2
3,714,182	-				-1.3
3,714,205	+				-3.0
3,714,488	+		PGA1_c35420	0.12	-0.2
3,714,535	+		PGA1_c35420	0.15	+1.6
3,714,535	+		PGA1_c35420	0.15	+0.4
3,714,535	+		PGA1_c35420	0.15	-0.2
3,714,543	-		PGA1_c35420	0.16	+0.6
3,714,543	-		PGA1_c35420	0.16	-0.9
3,714,549	-		PGA1_c35420	0.16	-0.7