Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30600

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
3,192,337	+		PGA1_c30580	0.61	-2.5
3,192,345	-		PGA1_c30580	0.64	-0.0
3,192,464	-				+0.9
3,192,497	+				+0.3
3,192,588	+				+0.5
3,192,869	-				-0.7
3,192,889	+				-0.1
3,192,923	+				+0.9
3,192,928	+				-0.4
3,192,938	+				-2.2
3,192,946	-				-0.3
3,192,946	-				+0.3
3,193,006	+				-0.6
3,193,013	-				-0.6
3,193,014	-				+0.6
3,193,041	-				+0.2
3,193,041	-				-1.3
3,193,046	-				-0.3
3,193,047	-				+0.0
3,193,047	-				+0.2
3,193,049	-				-0.5
3,193,073	+				+0.1
3,193,082	-				+1.2
3,193,082	-				-0.7
3,193,131	+				-2.2
3,193,151	+				-0.6
3,193,152	+				-0.1
3,193,152	+				+0.5
3,193,160	-				+0.7
3,193,160	-				-0.3
3,193,160	-				-1.9
3,193,186	+				+0.3
3,193,212	-				-0.2
3,193,242	-				-0.2
3,193,250	-				+0.6
3,193,274	+				+0.4
3,193,274	+				+1.3
3,193,274	+				+1.7
3,193,274	+				-1.0
3,193,274	+				+0.2
3,193,277	-				+0.1
3,193,282	-				-3.9
3,193,282	-				+0.9
3,193,282	-				+0.8
3,193,282	-				-1.2
3,193,282	-				-1.4
3,193,282	-				+0.3
3,193,282	-				+1.6
3,193,282	-				-3.6
3,193,285	+				-0.0
3,193,288	+				+0.2
3,193,288	+				-1.4
3,193,288	+				-1.6
3,193,288	+				-0.5
3,193,295	+				+0.2
3,193,296	-				+0.7
3,193,296	-				+0.3
3,193,296	-				+1.3
3,193,300	+				+0.4
3,193,300	+				+0.5
3,193,300	+				-2.4
3,193,300	+				+0.4
3,193,300	+				+0.3
3,193,300	+				+0.2
3,193,300	+				-0.5
3,193,303	-				-2.6
3,193,308	-				+1.1
3,193,308	-				+0.2
3,193,308	-				+0.8
3,193,308	-				+0.6
3,193,308	-				+0.9
3,193,331	+				-2.2
3,193,331	+				+0.8
3,193,345	-				-0.1
3,193,356	-				+0.2
3,193,375	+		PGA1_c30600	0.10	+0.4
3,193,375	+		PGA1_c30600	0.10	+0.2
3,193,375	+		PGA1_c30600	0.10	+1.9
3,193,375	+		PGA1_c30600	0.10	+0.1
3,193,375	-		PGA1_c30600	0.10	-2.1
3,193,383	-		PGA1_c30600	0.11	+0.3
3,193,383	-		PGA1_c30600	0.11	-1.8
3,193,383	-		PGA1_c30600	0.11	-0.5
3,193,394	+		PGA1_c30600	0.11	-0.7
3,193,394	+		PGA1_c30600	0.11	-0.5
3,193,394	+		PGA1_c30600	0.11	+0.6
3,193,394	+		PGA1_c30600	0.11	-2.8
3,193,402	-		PGA1_c30600	0.11	+0.9
3,193,404	-		PGA1_c30600	0.11	+0.7
3,193,473	-		PGA1_c30600	0.14	+0.2
3,193,514	-		PGA1_c30600	0.15	+0.4
3,193,518	-		PGA1_c30600	0.15	-1.5
3,193,591	-		PGA1_c30600	0.18	+0.1
3,193,617	-		PGA1_c30600	0.19	-2.3
3,193,659	+		PGA1_c30600	0.20	-1.5
3,193,659	+		PGA1_c30600	0.20	+0.6
3,193,705	-		PGA1_c30600	0.22	-0.1
3,193,719	+		PGA1_c30600	0.22	+0.2
3,193,733	+		PGA1_c30600	0.23	-0.3
3,193,741	-		PGA1_c30600	0.23	-0.3
3,193,754	-		PGA1_c30600	0.23	+0.7
3,193,754	-		PGA1_c30600	0.23	+0.5
3,193,754	-		PGA1_c30600	0.23	-1.6
3,193,828	-		PGA1_c30600	0.26	-0.4
3,193,837	+		PGA1_c30600	0.26	-0.5
3,193,848	+		PGA1_c30600	0.27	-0.2
3,193,856	-		PGA1_c30600	0.27	-2.8
3,193,858	+		PGA1_c30600	0.27	-1.2
3,193,858	+		PGA1_c30600	0.27	-0.2
3,193,858	+		PGA1_c30600	0.27	+0.0
3,193,866	-		PGA1_c30600	0.27	+0.3
3,193,875	+		PGA1_c30600	0.28	+1.6
3,193,914	-		PGA1_c30600	0.29	-0.1
3,193,920	+		PGA1_c30600	0.29	+0.6
3,193,932	+		PGA1_c30600	0.30	-1.9
3,193,963	-		PGA1_c30600	0.31	-1.0
3,193,973	-		PGA1_c30600	0.31	-1.0
3,194,031	-		PGA1_c30600	0.33	-0.4
3,194,041	-		PGA1_c30600	0.33	+0.0
3,194,060	+		PGA1_c30600	0.34	-0.1
3,194,060	+		PGA1_c30600	0.34	-2.0
3,194,067	-		PGA1_c30600	0.34	-0.8
3,194,067	-		PGA1_c30600	0.34	-1.3
3,194,068	-		PGA1_c30600	0.34	-0.0
3,194,102	-		PGA1_c30600	0.36	-1.3
3,194,103	+		PGA1_c30600	0.36	+0.5
3,194,119	-		PGA1_c30600	0.36	+1.0
3,194,129	-		PGA1_c30600	0.36	-0.5
3,194,171	-		PGA1_c30600	0.38	-1.3
3,194,231	-		PGA1_c30600	0.40	+0.9
3,194,363	+		PGA1_c30600	0.45	+0.7
3,194,363	+		PGA1_c30600	0.45	-0.7
3,194,371	-		PGA1_c30600	0.45	+0.7
3,194,371	-		PGA1_c30600	0.45	-0.9
3,194,397	-		PGA1_c30600	0.46	-1.2
3,194,505	-		PGA1_c30600	0.50	-0.4
3,194,527	+		PGA1_c30600	0.50	-0.9
3,194,584	+		PGA1_c30600	0.52	-0.4
3,194,606	+		PGA1_c30600	0.53	-2.5
3,194,734	+		PGA1_c30600	0.57	-0.7
3,194,775	+		PGA1_c30600	0.59	-2.2
3,194,786	-		PGA1_c30600	0.59	-0.5
3,194,827	-		PGA1_c30600	0.61	-0.9
3,194,837	+		PGA1_c30600	0.61	-0.3
3,194,843	+		PGA1_c30600	0.61	+1.4
3,194,851	-		PGA1_c30600	0.62	-1.3
3,194,851	-		PGA1_c30600	0.62	-2.5
3,194,869	+		PGA1_c30600	0.62	-0.3
3,194,908	-		PGA1_c30600	0.64	-0.1
3,194,917	-		PGA1_c30600	0.64	+0.4
3,194,932	+		PGA1_c30600	0.64	+0.1
3,194,932	+		PGA1_c30600	0.64	-0.7
3,195,053	+		PGA1_c30600	0.69	+0.9
3,195,053	-		PGA1_c30600	0.69	+0.0
3,195,069	+		PGA1_c30600	0.69	+0.4
3,195,084	+		PGA1_c30600	0.70	+1.0
3,195,109	-		PGA1_c30600	0.71	+0.6
3,195,163	-		PGA1_c30600	0.72	-0.1
3,195,163	-		PGA1_c30600	0.72	-0.8
3,195,163	-		PGA1_c30600	0.72	-0.6
3,195,163	-		PGA1_c30600	0.72	-0.4
3,195,163	-		PGA1_c30600	0.72	-0.4
3,195,163	-		PGA1_c30600	0.72	-2.4
3,195,163	-		PGA1_c30600	0.72	+0.2
3,195,163	-		PGA1_c30600	0.72	+0.6
3,195,163	-		PGA1_c30600	0.72	-2.6
3,195,163	-		PGA1_c30600	0.72	-1.2
3,195,163	-		PGA1_c30600	0.72	-0.2
3,195,163	-		PGA1_c30600	0.72	+1.6
3,195,163	-		PGA1_c30600	0.72	-1.4
3,195,248	+		PGA1_c30600	0.75	-0.5
3,195,287	+		PGA1_c30600	0.77	-0.7
3,195,287	+		PGA1_c30600	0.77	-1.9
3,195,287	+		PGA1_c30600	0.77	-2.4
3,195,303	-		PGA1_c30600	0.77	-0.5
3,195,305	+		PGA1_c30600	0.77	-0.7
3,195,305	-		PGA1_c30600	0.77	-1.3
3,195,315	+		PGA1_c30600	0.78	+0.1
3,195,347	-		PGA1_c30600	0.79	-0.4
3,195,388	+		PGA1_c30600	0.80	+1.2
3,195,396	-		PGA1_c30600	0.80	+0.2
3,195,452	-		PGA1_c30600	0.82	-1.5
3,195,506	+		PGA1_c30600	0.84	-0.8
3,195,514	-		PGA1_c30600	0.85	+0.1
3,195,562	+		PGA1_c30600	0.86	+0.5
3,195,568	-		PGA1_c30600	0.86	+0.8
3,195,698	+				+0.7
3,195,708	+				-0.3
3,195,708	+				+0.3
3,195,708	+				-0.1
3,195,716	-				-0.7
3,195,762	+				-0.2
3,195,762	+				+0.2
3,195,773	+				-0.1
3,195,773	+				-0.6
3,195,773	+				+0.2
3,195,775	-				-1.1
3,195,795	+				-1.3
3,195,837	+				-0.2
3,195,839	+				+0.2
3,195,847	+				+0.1
3,195,855	-				-1.2
3,195,855	-				-0.4
3,195,870	-				+0.1
3,195,934	-				-0.8
3,195,960	-				-0.0
3,195,987	+				+0.7
3,195,995	-				+0.1
3,196,028	-				+0.4
3,196,038	-				-0.1
3,196,050	-				-1.0
3,196,078	+				-0.3
3,196,078	+				+0.3
3,196,211	+				-0.1
3,196,219	-				-0.3
3,196,219	-				-2.4
3,196,219	-				+0.9
3,196,280	-				+0.0
3,196,300	-				-1.8
3,196,347	+		PGA1_c30610	0.24	+0.9
3,196,348	-		PGA1_c30610	0.24	-2.3
3,196,350	+		PGA1_c30610	0.25	+1.1
3,196,358	-		PGA1_c30610	0.29	-0.8
3,196,376	+		PGA1_c30610	0.38	+0.9
3,196,384	-		PGA1_c30610	0.41	+0.4
3,196,384	-		PGA1_c30610	0.41	-0.6
3,196,393	-		PGA1_c30610	0.46	+0.7
3,196,396	+		PGA1_c30610	0.47	+0.1
3,196,398	-		PGA1_c30610	0.48	-0.3
3,196,398	-		PGA1_c30610	0.48	-0.9
3,196,404	-		PGA1_c30610	0.51	+0.3
3,196,411	+		PGA1_c30610	0.54	-0.6
3,196,456	+		PGA1_c30610	0.75	-1.1
3,196,466	+		PGA1_c30610	0.80	+0.2
3,196,466	+		PGA1_c30610	0.80	+0.7
3,196,466	+		PGA1_c30610	0.80	+2.5
3,196,473	+		PGA1_c30610	0.83	+0.9
3,196,474	-		PGA1_c30610	0.84	+0.6
3,196,474	-		PGA1_c30610	0.84	-3.0
3,196,474	-		PGA1_c30610	0.84	+0.3
3,196,481	-		PGA1_c30610	0.87	-0.7
3,196,542	+				+0.2
3,196,542	+				-0.3
3,196,570	-				+0.0
3,196,570	-				-0.5
3,196,570	-				+0.1
3,196,575	-				-1.1
3,196,575	-				+1.7