Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25010

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
2,604,738	+				+0.0
2,604,746	-				+0.4
2,604,787	-				-0.5
2,604,834	+		PGA1_c25000	0.14	-0.2
2,604,842	+		PGA1_c25000	0.15	-0.7
2,604,909	-		PGA1_c25000	0.30	-2.3
2,604,930	-		PGA1_c25000	0.34	-1.2
2,605,052	-		PGA1_c25000	0.60	-0.3
2,605,057	+		PGA1_c25000	0.61	-1.4
2,605,062	+		PGA1_c25000	0.62	-0.8
2,605,065	-		PGA1_c25000	0.63	-1.3
2,605,065	-		PGA1_c25000	0.63	-0.8
2,605,095	+		PGA1_c25000	0.69	-2.3
2,605,109	-		PGA1_c25000	0.72	+0.6
2,605,167	+		PGA1_c25000	0.85	-0.3
2,605,169	+		PGA1_c25000	0.85	+0.2
2,605,203	+				-1.0
2,605,258	-				+0.1
2,605,259	+				+0.3
2,605,299	-				-0.9
2,605,299	-				+1.0
2,605,362	-		PGA1_c25010	0.12	-0.3
2,605,414	+		PGA1_c25010	0.17	+0.6
2,605,471	-		PGA1_c25010	0.22	-0.9
2,605,473	+		PGA1_c25010	0.23	+0.9
2,605,473	+		PGA1_c25010	0.23	+0.3
2,605,473	+		PGA1_c25010	0.23	-0.8
2,605,473	+		PGA1_c25010	0.23	-0.1
2,605,554	+		PGA1_c25010	0.30	+0.2
2,605,570	-		PGA1_c25010	0.32	-1.4
2,605,580	+		PGA1_c25010	0.33	+1.4
2,605,680	+		PGA1_c25010	0.43	-2.0
2,605,680	+		PGA1_c25010	0.43	-0.5
2,605,680	+		PGA1_c25010	0.43	+0.1
2,605,680	+		PGA1_c25010	0.43	+0.4
2,605,680	+		PGA1_c25010	0.43	-0.1
2,605,688	+		PGA1_c25010	0.43	+1.0
2,605,688	-		PGA1_c25010	0.43	+1.5
2,605,688	-		PGA1_c25010	0.43	-1.1
2,605,718	-		PGA1_c25010	0.46	+0.8
2,605,725	+		PGA1_c25010	0.47	-1.1
2,605,752	-		PGA1_c25010	0.49	-0.3
2,605,752	-		PGA1_c25010	0.49	+0.9
2,605,780	+		PGA1_c25010	0.52	-0.1
2,605,809	-		PGA1_c25010	0.55	+0.1
2,605,857	-		PGA1_c25010	0.60	+0.2
2,605,897	-		PGA1_c25010	0.63	-0.0
2,605,900	+		PGA1_c25010	0.64	+0.3
2,605,900	+		PGA1_c25010	0.64	-1.6
2,605,900	+		PGA1_c25010	0.64	+1.0
2,605,944	-		PGA1_c25010	0.68	+0.1
2,606,103	-		PGA1_c25010	0.83	+0.9
2,606,108	-		PGA1_c25010	0.84	-1.8
2,606,110	+		PGA1_c25010	0.84	+1.0
2,606,115	+		PGA1_c25010	0.85	+0.6
2,606,123	-		PGA1_c25010	0.85	-0.5
2,606,218	+				-2.4
2,606,297	+				-1.6
2,606,329	+				-0.8
2,606,330	+				-0.4
2,606,473	-		PGA1_c25020	0.18	+0.0
2,606,527	-		PGA1_c25020	0.25	+0.0
2,606,532	-		PGA1_c25020	0.25	+0.2
2,606,641	-		PGA1_c25020	0.38	+0.1
2,606,641	-		PGA1_c25020	0.38	-0.1
2,606,641	-		PGA1_c25020	0.38	-0.9
2,606,685	-		PGA1_c25020	0.43	-1.7
2,606,726	-		PGA1_c25020	0.47	-0.3
2,606,748	+		PGA1_c25020	0.50	+0.3
2,606,791	+		PGA1_c25020	0.55	+1.0
2,606,791	+		PGA1_c25020	0.55	-0.5
2,606,791	+		PGA1_c25020	0.55	+0.1
2,606,799	-		PGA1_c25020	0.56	-0.2
2,606,857	-		PGA1_c25020	0.62	+0.9
2,606,862	-		PGA1_c25020	0.63	+0.6
2,606,863	-		PGA1_c25020	0.63	+0.0
2,606,865	+		PGA1_c25020	0.63	+1.0
2,606,895	-		PGA1_c25020	0.67	+1.0
2,606,900	+		PGA1_c25020	0.67	-1.1
2,606,933	-		PGA1_c25020	0.71	+0.9
2,606,979	+		PGA1_c25020	0.76	-1.5
2,606,983	-		PGA1_c25020	0.77	+0.7
2,606,988	-		PGA1_c25020	0.77	-0.1
2,607,016	+		PGA1_c25020	0.80	-1.9
2,607,017	-		PGA1_c25020	0.81	-0.2
2,607,134	+				+0.2
2,607,134	+				-0.6
2,607,171	+				+0.3
2,607,268	+				-0.6
2,607,269	-				-0.0
2,607,271	-				-0.1