Experiment: m.b. copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1388 and HP15_1389 overlap by 1 nucleotides HP15_1389 and HP15_1390 are separated by 164 nucleotides HP15_1390 and HP15_1391 are separated by 13 nucleotides HP15_1391 and HP15_1392 are separated by 47 nucleotides HP15_1392 and HP15_1393 are separated by 18 nucleotides
HP15_1388: HP15_1388 - iron-containing alcohol dehydrogenase, at 1,464,161 to 1,465,348
_1388
HP15_1389: HP15_1389 - conserved hypothetical protein, at 1,465,348 to 1,465,902
_1389
HP15_1390: HP15_1390 - peptidase M48, Ste24p, at 1,466,067 to 1,467,344
_1390
HP15_1391: HP15_1391 - hypothetical protein, at 1,467,358 to 1,467,495
_1391
HP15_1392: HP15_1392 - membrane protein containing DUF599, at 1,467,543 to 1,468,283
_1392
HP15_1393: HP15_1393 - thioesterase superfamily protein, at 1,468,302 to 1,468,772
_1393
Position (kb)
1466
1467
1468 Strain fitness (log2 ratio)
-1
0
1 at 1465.257 kb on + strand at 1465.282 kb on + strand at 1465.290 kb on - strand at 1465.454 kb on - strand, within HP15_1389 at 1465.506 kb on - strand, within HP15_1389 at 1465.689 kb on - strand, within HP15_1389 at 1465.707 kb on + strand, within HP15_1389 at 1465.715 kb on - strand, within HP15_1389 at 1465.748 kb on + strand, within HP15_1389 at 1465.804 kb on - strand, within HP15_1389 at 1466.022 kb on + strand at 1466.032 kb on - strand at 1466.139 kb on - strand at 1466.171 kb on + strand at 1466.235 kb on + strand, within HP15_1390 at 1466.278 kb on - strand, within HP15_1390 at 1466.458 kb on + strand, within HP15_1390 at 1466.537 kb on - strand, within HP15_1390 at 1466.589 kb on + strand, within HP15_1390 at 1466.638 kb on + strand, within HP15_1390 at 1466.638 kb on + strand, within HP15_1390 at 1466.724 kb on + strand, within HP15_1390 at 1466.830 kb on + strand, within HP15_1390 at 1466.895 kb on + strand, within HP15_1390 at 1466.926 kb on - strand, within HP15_1390 at 1466.928 kb on + strand, within HP15_1390 at 1466.958 kb on + strand, within HP15_1390 at 1467.058 kb on + strand, within HP15_1390 at 1467.168 kb on - strand, within HP15_1390 at 1467.193 kb on + strand, within HP15_1390 at 1467.292 kb on + strand at 1467.381 kb on + strand, within HP15_1391 at 1467.381 kb on + strand, within HP15_1391 at 1467.600 kb on - strand at 1467.660 kb on - strand, within HP15_1392 at 1467.740 kb on + strand, within HP15_1392 at 1467.753 kb on + strand, within HP15_1392 at 1467.811 kb on + strand, within HP15_1392 at 1467.811 kb on - strand, within HP15_1392 at 1467.819 kb on - strand, within HP15_1392 at 1467.830 kb on + strand, within HP15_1392 at 1467.888 kb on + strand, within HP15_1392 at 1468.078 kb on - strand, within HP15_1392 at 1468.156 kb on + strand, within HP15_1392 at 1468.216 kb on + strand at 1468.290 kb on + strand at 1468.298 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 1 mM remove 1,465,257 + -0.2 1,465,282 + +0.1 1,465,290 - -0.1 1,465,454 - HP15_1389 0.19 +0.3 1,465,506 - HP15_1389 0.28 +0.3 1,465,689 - HP15_1389 0.61 -0.1 1,465,707 + HP15_1389 0.65 -0.0 1,465,715 - HP15_1389 0.66 -0.1 1,465,748 + HP15_1389 0.72 -0.0 1,465,804 - HP15_1389 0.82 -0.4 1,466,022 + -0.0 1,466,032 - +0.4 1,466,139 - +0.3 1,466,171 + +0.1 1,466,235 + HP15_1390 0.13 +0.1 1,466,278 - HP15_1390 0.17 +0.6 1,466,458 + HP15_1390 0.31 +0.0 1,466,537 - HP15_1390 0.37 +0.4 1,466,589 + HP15_1390 0.41 +0.1 1,466,638 + HP15_1390 0.45 -0.1 1,466,638 + HP15_1390 0.45 +0.1 1,466,724 + HP15_1390 0.51 +0.5 1,466,830 + HP15_1390 0.60 +0.7 1,466,895 + HP15_1390 0.65 -0.1 1,466,926 - HP15_1390 0.67 +0.1 1,466,928 + HP15_1390 0.67 -0.1 1,466,958 + HP15_1390 0.70 +0.1 1,467,058 + HP15_1390 0.78 +0.6 1,467,168 - HP15_1390 0.86 +0.0 1,467,193 + HP15_1390 0.88 +0.1 1,467,292 + +0.6 1,467,381 + HP15_1391 0.17 -0.5 1,467,381 + HP15_1391 0.17 +0.0 1,467,600 - -0.6 1,467,660 - HP15_1392 0.16 +0.2 1,467,740 + HP15_1392 0.27 +0.4 1,467,753 + HP15_1392 0.28 +0.2 1,467,811 + HP15_1392 0.36 +0.3 1,467,811 - HP15_1392 0.36 +0.2 1,467,819 - HP15_1392 0.37 -0.2 1,467,830 + HP15_1392 0.39 -0.1 1,467,888 + HP15_1392 0.47 +0.3 1,468,078 - HP15_1392 0.72 +0.2 1,468,156 + HP15_1392 0.83 +0.0 1,468,216 + -0.8 1,468,290 + -0.8 1,468,298 - -0.0
Or see this region's nucleotide sequence