Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11400

Experiment: m.b. Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nickel (II) chloride 1 mM
1,180,150	-		PGA1_c11390	0.66	-1.0
1,180,242	-		PGA1_c11390	0.73	+0.1
1,180,263	+		PGA1_c11390	0.74	-1.0
1,180,455	-		PGA1_c11390	0.88	+1.8
1,180,528	+				+0.8
1,180,662	+				-1.5
1,180,786	+				+1.0
1,180,828	-				+0.9
1,180,893	+				-0.6
1,180,901	-				-0.7
1,180,901	-				-2.0
1,180,929	+				-0.3
1,180,949	+				+0.8
1,180,952	-				+1.4
1,180,959	+				+0.3
1,180,959	+				-0.5
1,180,959	+				+0.0
1,180,959	+				+1.0
1,180,964	+				+1.9
1,180,967	-				-1.2
1,180,967	-				-0.0
1,180,967	-				+1.5
1,180,967	-				-0.2
1,180,971	+				+0.6
1,181,021	-		PGA1_c11400	0.11	+0.0
1,181,028	-		PGA1_c11400	0.13	+2.9
1,181,060	-		PGA1_c11400	0.21	+1.5
1,181,087	+		PGA1_c11400	0.27	-0.4
1,181,095	-		PGA1_c11400	0.29	+1.2
1,181,114	-		PGA1_c11400	0.34	+1.0
1,181,135	+		PGA1_c11400	0.39	+2.1
1,181,180	-		PGA1_c11400	0.50	+1.7
1,181,232	+		PGA1_c11400	0.62	+1.8
1,181,268	+		PGA1_c11400	0.71	+1.2
1,181,357	+				+1.8
1,181,476	-				+0.4
1,181,498	+				+0.6
1,181,553	-				+0.9
1,181,568	+				+0.0
1,181,741	+		PGA1_c11410	0.11	-1.9
1,181,765	-		PGA1_c11410	0.14	-0.2
1,181,808	-		PGA1_c11410	0.19	+0.5
1,181,815	+		PGA1_c11410	0.19	-0.4
1,181,886	+		PGA1_c11410	0.27	+1.4
1,181,935	+		PGA1_c11410	0.33	+0.9
1,181,943	-		PGA1_c11410	0.34	-0.2
1,181,985	-		PGA1_c11410	0.38	+0.3
1,182,040	+		PGA1_c11410	0.44	+0.5
1,182,139	+		PGA1_c11410	0.55	-2.6
1,182,145	+		PGA1_c11410	0.56	+0.9
1,182,158	-		PGA1_c11410	0.58	-0.7
1,182,182	+		PGA1_c11410	0.60	-0.0
1,182,258	+		PGA1_c11410	0.69	-0.6