Strain Fitness in Shewanella oneidensis MR-1 around SO_A0111
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 93,496 | + | SOA0110 | 0.81 | +0.6 | |
| 93,532 | - | SOA0110 | 0.82 | +1.5 | |
| 93,722 | + | SOA0110 | 0.86 | +1.0 | |
| 93,876 | - | SOA0110 | 0.90 | -0.9 | |
| 93,902 | + | +0.1 | |||
| 93,902 | + | +1.7 | |||
| 93,929 | - | +0.7 | |||
| 94,028 | + | +0.3 | |||
| 94,028 | + | -0.6 | |||
| 94,360 | + | +0.5 | |||
| 94,417 | - | SO_A0111 | 0.32 | -1.8 |
Or see this region's nucleotide sequence