Experiment: Glucose defined 30C timecourse1 timepoint 3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2675 and Psest_2676 are separated by 49 nucleotides Psest_2676 and Psest_2677 are separated by 240 nucleotides
Psest_2675: Psest_2675 - Predicted membrane-bound metal-dependent hydrolases, at 2,863,080 to 2,864,123
_2675
Psest_2676: Psest_2676 - Methyl-accepting chemotaxis protein, at 2,864,173 to 2,866,125
_2676
Psest_2677: Psest_2677 - ABC-type multidrug transport system, ATPase and permease components, at 2,866,366 to 2,868,144
_2677
Position (kb)
2864
2865
2866
2867 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2863.213 kb on - strand, within Psest_2675 at 2863.239 kb on + strand, within Psest_2675 at 2863.239 kb on + strand, within Psest_2675 at 2863.239 kb on + strand, within Psest_2675 at 2863.239 kb on + strand, within Psest_2675 at 2863.239 kb on + strand, within Psest_2675 at 2863.407 kb on + strand, within Psest_2675 at 2863.408 kb on - strand, within Psest_2675 at 2863.462 kb on + strand, within Psest_2675 at 2863.463 kb on - strand, within Psest_2675 at 2863.556 kb on + strand, within Psest_2675 at 2863.557 kb on - strand, within Psest_2675 at 2863.561 kb on - strand, within Psest_2675 at 2863.584 kb on + strand, within Psest_2675 at 2863.737 kb on + strand, within Psest_2675 at 2863.737 kb on + strand, within Psest_2675 at 2863.737 kb on + strand, within Psest_2675 at 2863.740 kb on + strand, within Psest_2675 at 2863.741 kb on - strand, within Psest_2675 at 2863.741 kb on - strand, within Psest_2675 at 2864.027 kb on + strand at 2864.115 kb on - strand at 2864.167 kb on + strand at 2864.167 kb on + strand at 2864.167 kb on + strand at 2864.167 kb on + strand at 2864.168 kb on - strand at 2864.168 kb on - strand at 2864.431 kb on + strand, within Psest_2676 at 2864.431 kb on + strand, within Psest_2676 at 2865.139 kb on - strand, within Psest_2676 at 2865.233 kb on + strand, within Psest_2676 at 2865.233 kb on + strand, within Psest_2676 at 2865.233 kb on + strand, within Psest_2676 at 2865.234 kb on - strand, within Psest_2676 at 2865.520 kb on - strand, within Psest_2676 at 2865.520 kb on - strand, within Psest_2676 at 2865.520 kb on - strand, within Psest_2676 at 2865.520 kb on - strand, within Psest_2676 at 2865.609 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.656 kb on + strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.657 kb on - strand, within Psest_2676 at 2865.660 kb on + strand, within Psest_2676 at 2865.661 kb on - strand, within Psest_2676 at 2865.661 kb on - strand, within Psest_2676 at 2865.715 kb on - strand at 2865.715 kb on - strand, within Psest_2676 at 2865.756 kb on - strand, within Psest_2676 at 2865.756 kb on - strand, within Psest_2676 at 2865.756 kb on - strand, within Psest_2676 at 2865.756 kb on - strand, within Psest_2676 at 2865.777 kb on - strand, within Psest_2676 at 2865.810 kb on - strand, within Psest_2676 at 2866.054 kb on + strand at 2866.055 kb on - strand at 2866.055 kb on - strand at 2866.173 kb on + strand at 2866.173 kb on + strand at 2866.173 kb on + strand at 2866.173 kb on + strand at 2866.179 kb on + strand at 2866.180 kb on - strand at 2866.201 kb on - strand at 2866.214 kb on - strand at 2866.240 kb on + strand at 2866.240 kb on + strand at 2866.241 kb on - strand at 2866.397 kb on + strand at 2866.468 kb on + strand at 2866.562 kb on + strand, within Psest_2677 at 2867.011 kb on - strand, within Psest_2677 at 2867.011 kb on - strand, within Psest_2677
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose defined 30C timecourse1 timepoint 3 remove 2,863,213 - Psest_2675 0.13 +0.3 2,863,239 + Psest_2675 0.15 +0.1 2,863,239 + Psest_2675 0.15 -0.2 2,863,239 + Psest_2675 0.15 +0.9 2,863,239 + Psest_2675 0.15 +0.7 2,863,239 + Psest_2675 0.15 -0.5 2,863,407 + Psest_2675 0.31 +1.1 2,863,408 - Psest_2675 0.31 -1.4 2,863,462 + Psest_2675 0.37 +0.7 2,863,463 - Psest_2675 0.37 +0.5 2,863,556 + Psest_2675 0.46 +0.7 2,863,557 - Psest_2675 0.46 -0.6 2,863,561 - Psest_2675 0.46 +0.5 2,863,584 + Psest_2675 0.48 +0.5 2,863,737 + Psest_2675 0.63 +0.5 2,863,737 + Psest_2675 0.63 +0.4 2,863,737 + Psest_2675 0.63 -0.8 2,863,740 + Psest_2675 0.63 +0.2 2,863,741 - Psest_2675 0.63 +1.0 2,863,741 - Psest_2675 0.63 +0.4 2,864,027 + +0.3 2,864,115 - +0.8 2,864,167 + -0.0 2,864,167 + +0.4 2,864,167 + +0.0 2,864,167 + -1.4 2,864,168 - -0.3 2,864,168 - +0.1 2,864,431 + Psest_2676 0.13 +0.2 2,864,431 + Psest_2676 0.13 +0.5 2,865,139 - Psest_2676 0.49 +1.4 2,865,233 + Psest_2676 0.54 -0.3 2,865,233 + Psest_2676 0.54 -1.2 2,865,233 + Psest_2676 0.54 +0.5 2,865,234 - Psest_2676 0.54 +2.1 2,865,520 - Psest_2676 0.69 +0.9 2,865,520 - Psest_2676 0.69 +0.4 2,865,520 - Psest_2676 0.69 -0.2 2,865,520 - Psest_2676 0.69 -0.3 2,865,609 + Psest_2676 0.74 -0.0 2,865,656 + Psest_2676 0.76 -0.2 2,865,656 + Psest_2676 0.76 +0.3 2,865,656 + Psest_2676 0.76 +1.4 2,865,656 + Psest_2676 0.76 -0.4 2,865,656 + Psest_2676 0.76 +0.8 2,865,656 + Psest_2676 0.76 +1.7 2,865,656 + Psest_2676 0.76 +0.9 2,865,656 + Psest_2676 0.76 -0.4 2,865,656 + Psest_2676 0.76 +0.4 2,865,656 + Psest_2676 0.76 +1.7 2,865,657 - Psest_2676 0.76 +0.2 2,865,657 - Psest_2676 0.76 -0.1 2,865,657 - Psest_2676 0.76 -0.1 2,865,657 - Psest_2676 0.76 +0.9 2,865,657 - Psest_2676 0.76 -1.9 2,865,657 - Psest_2676 0.76 +0.9 2,865,657 - Psest_2676 0.76 +0.5 2,865,657 - Psest_2676 0.76 +0.1 2,865,657 - Psest_2676 0.76 +0.8 2,865,657 - Psest_2676 0.76 -0.5 2,865,660 + Psest_2676 0.76 -0.2 2,865,661 - Psest_2676 0.76 -0.4 2,865,661 - Psest_2676 0.76 +2.3 2,865,715 - -0.6 2,865,715 - Psest_2676 0.79 +0.1 2,865,756 - Psest_2676 0.81 -0.1 2,865,756 - Psest_2676 0.81 +1.7 2,865,756 - Psest_2676 0.81 +0.1 2,865,756 - Psest_2676 0.81 -0.2 2,865,777 - Psest_2676 0.82 -0.1 2,865,810 - Psest_2676 0.84 +0.8 2,866,054 + -0.1 2,866,055 - -0.1 2,866,055 - +0.6 2,866,173 + -0.3 2,866,173 + -0.1 2,866,173 + +0.2 2,866,173 + -0.1 2,866,179 + +0.2 2,866,180 - +0.4 2,866,201 - +0.8 2,866,214 - +0.8 2,866,240 + +0.9 2,866,240 + -0.0 2,866,241 - -0.3 2,866,397 + -0.2 2,866,468 + -0.6 2,866,562 + Psest_2677 0.11 +0.9 2,867,011 - Psest_2677 0.36 -0.4 2,867,011 - Psest_2677 0.36 +0.3
Or see this region's nucleotide sequence