Experiment: Glucose defined 30C timecourse1 timepoint 3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2589 and Psest_2590 are separated by 95 nucleotides Psest_2590 and Psest_2591 are separated by 11 nucleotides Psest_2591 and Psest_2592 are separated by 136 nucleotides
Psest_2589: Psest_2589 - 3-isopropylmalate dehydrogenase, at 2,771,214 to 2,772,296
_2589
Psest_2590: Psest_2590 - 3-isopropylmalate dehydratase, small subunit, at 2,772,392 to 2,773,039
_2590
Psest_2591: Psest_2591 - 3-isopropylmalate dehydratase, large subunit, at 2,773,051 to 2,774,478
_2591
Psest_2592: Psest_2592 - Transcriptional regulator, at 2,774,615 to 2,775,490
_2592
Position (kb)
2773
2774
2775 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2772.146 kb on - strand, within Psest_2589 at 2772.390 kb on + strand at 2772.391 kb on - strand at 2772.691 kb on - strand, within Psest_2590 at 2773.072 kb on + strand at 2773.072 kb on + strand at 2773.072 kb on + strand at 2773.073 kb on - strand at 2773.073 kb on - strand at 2773.430 kb on - strand, within Psest_2591 at 2773.430 kb on - strand, within Psest_2591 at 2773.430 kb on - strand, within Psest_2591 at 2773.487 kb on + strand, within Psest_2591 at 2773.488 kb on - strand, within Psest_2591 at 2773.488 kb on - strand, within Psest_2591 at 2774.399 kb on + strand at 2774.399 kb on + strand at 2774.399 kb on + strand at 2774.399 kb on + strand at 2774.399 kb on + strand at 2774.400 kb on - strand at 2774.400 kb on - strand at 2774.460 kb on - strand at 2774.469 kb on + strand at 2774.503 kb on - strand at 2774.516 kb on - strand at 2774.516 kb on - strand at 2774.543 kb on - strand at 2774.587 kb on - strand at 2774.748 kb on + strand, within Psest_2592 at 2775.011 kb on + strand, within Psest_2592 at 2775.012 kb on - strand, within Psest_2592 at 2775.012 kb on - strand, within Psest_2592 at 2775.021 kb on + strand, within Psest_2592 at 2775.022 kb on - strand, within Psest_2592 at 2775.022 kb on - strand, within Psest_2592 at 2775.123 kb on + strand, within Psest_2592 at 2775.266 kb on - strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.284 kb on + strand, within Psest_2592 at 2775.285 kb on - strand, within Psest_2592 at 2775.285 kb on - strand, within Psest_2592 at 2775.285 kb on - strand, within Psest_2592 at 2775.297 kb on + strand, within Psest_2592 at 2775.298 kb on - strand, within Psest_2592 at 2775.334 kb on - strand, within Psest_2592 at 2775.410 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose defined 30C timecourse1 timepoint 3 remove 2,772,146 - Psest_2589 0.86 -1.7 2,772,390 + -3.9 2,772,391 - -0.4 2,772,691 - Psest_2590 0.46 -5.5 2,773,072 + -3.4 2,773,072 + -3.3 2,773,072 + -4.5 2,773,073 - -0.0 2,773,073 - +0.2 2,773,430 - Psest_2591 0.27 -4.0 2,773,430 - Psest_2591 0.27 -0.7 2,773,430 - Psest_2591 0.27 -3.5 2,773,487 + Psest_2591 0.31 -5.3 2,773,488 - Psest_2591 0.31 -2.8 2,773,488 - Psest_2591 0.31 -4.4 2,774,399 + -4.2 2,774,399 + -2.4 2,774,399 + -2.4 2,774,399 + -1.7 2,774,399 + -3.3 2,774,400 - -3.6 2,774,400 - -3.3 2,774,460 - -3.5 2,774,469 + -4.3 2,774,503 - +0.0 2,774,516 - +0.2 2,774,516 - +0.1 2,774,543 - -0.4 2,774,587 - +0.7 2,774,748 + Psest_2592 0.15 +0.3 2,775,011 + Psest_2592 0.45 -0.0 2,775,012 - Psest_2592 0.45 +1.2 2,775,012 - Psest_2592 0.45 -0.2 2,775,021 + Psest_2592 0.46 +0.4 2,775,022 - Psest_2592 0.46 -0.4 2,775,022 - Psest_2592 0.46 -1.0 2,775,123 + Psest_2592 0.58 +0.0 2,775,266 - Psest_2592 0.74 -0.8 2,775,284 + Psest_2592 0.76 -0.9 2,775,284 + Psest_2592 0.76 +0.2 2,775,284 + Psest_2592 0.76 -0.5 2,775,284 + Psest_2592 0.76 -0.2 2,775,284 + Psest_2592 0.76 -0.3 2,775,284 + Psest_2592 0.76 +0.2 2,775,284 + Psest_2592 0.76 -1.0 2,775,284 + Psest_2592 0.76 +0.8 2,775,284 + Psest_2592 0.76 -0.4 2,775,284 + Psest_2592 0.76 -0.3 2,775,285 - Psest_2592 0.76 -0.0 2,775,285 - Psest_2592 0.76 -0.4 2,775,285 - Psest_2592 0.76 +0.0 2,775,297 + Psest_2592 0.78 -0.0 2,775,298 - Psest_2592 0.78 +0.4 2,775,334 - Psest_2592 0.82 -0.2 2,775,410 + +0.2
Or see this region's nucleotide sequence