Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2583
Experiment: Glucose defined 30C timecourse1 timepoint 3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Glucose defined 30C timecourse1 timepoint 3 |
---|---|---|---|---|---|
remove | |||||
2,764,305 | - | -0.7 | |||
2,764,305 | - | -1.0 | |||
2,764,305 | - | -0.7 | |||
2,764,390 | - | +0.2 | |||
2,764,683 | - | Psest_2584 | 0.38 | -2.7 | |
2,764,695 | - | Psest_2584 | 0.40 | -5.0 | |
2,764,720 | - | Psest_2584 | 0.44 | -3.7 | |
2,764,896 | - | Psest_2584 | 0.73 | -3.1 | |
2,764,899 | - | Psest_2584 | 0.73 | -5.6 | |
2,764,977 | + | Psest_2584 | 0.86 | -1.7 | |
2,764,977 | + | Psest_2584 | 0.86 | -2.9 | |
2,764,978 | - | Psest_2584 | 0.86 | -2.8 | |
2,764,978 | - | Psest_2584 | 0.86 | -7.3 | |
2,764,978 | - | Psest_2584 | 0.86 | -2.3 | |
2,765,043 | + | -3.4 | |||
2,765,044 | - | -1.7 | |||
2,765,071 | + | -5.3 | |||
2,765,071 | + | -3.2 | |||
2,765,075 | + | -1.9 | |||
2,765,075 | + | -5.1 | |||
2,765,075 | + | -3.7 | |||
2,765,075 | + | -5.5 | |||
2,765,076 | - | -3.2 | |||
2,765,080 | - | +0.1 |
Or see this region's nucleotide sequence