Experiment: Glucose defined 30C timecourse1 timepoint 3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2536 and Psest_2537 are separated by 205 nucleotides Psest_2537 and Psest_2538 are separated by 106 nucleotides Psest_2538 and Psest_2539 are separated by 24 nucleotides
Psest_2536: Psest_2536 - NAD+ synthetase, at 2,716,576 to 2,717,403
_2536
Psest_2537: Psest_2537 - oxygen-independent coproporphyrinogen III oxidase, at 2,717,609 to 2,718,991
_2537
Psest_2538: Psest_2538 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 2,719,098 to 2,719,832
_2538
Psest_2539: Psest_2539 - adenine phosphoribosyltransferase, at 2,719,857 to 2,720,405
_2539
Position (kb)
2717
2718
2719 Strain fitness (log2 ratio)
-2
-1
0
1 at 2717.423 kb on - strand at 2717.573 kb on - strand at 2717.674 kb on + strand at 2717.674 kb on + strand at 2717.674 kb on + strand at 2717.674 kb on + strand at 2717.674 kb on + strand at 2717.674 kb on + strand at 2717.674 kb on + strand at 2717.675 kb on - strand at 2717.675 kb on - strand at 2717.675 kb on - strand at 2717.777 kb on + strand, within Psest_2537 at 2717.810 kb on + strand, within Psest_2537 at 2717.814 kb on - strand, within Psest_2537 at 2717.938 kb on - strand, within Psest_2537 at 2717.938 kb on - strand, within Psest_2537 at 2718.153 kb on + strand, within Psest_2537 at 2718.154 kb on - strand, within Psest_2537 at 2718.154 kb on - strand, within Psest_2537 at 2718.254 kb on + strand, within Psest_2537 at 2718.254 kb on + strand, within Psest_2537 at 2718.254 kb on + strand, within Psest_2537 at 2718.254 kb on + strand, within Psest_2537 at 2718.254 kb on + strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.255 kb on - strand, within Psest_2537 at 2718.345 kb on - strand, within Psest_2537 at 2718.345 kb on - strand, within Psest_2537 at 2718.345 kb on - strand, within Psest_2537 at 2718.384 kb on + strand, within Psest_2537 at 2718.385 kb on - strand, within Psest_2537 at 2718.385 kb on - strand, within Psest_2537 at 2718.421 kb on - strand, within Psest_2537 at 2718.421 kb on - strand, within Psest_2537 at 2718.421 kb on - strand, within Psest_2537 at 2718.470 kb on + strand, within Psest_2537 at 2718.626 kb on + strand, within Psest_2537 at 2718.648 kb on + strand, within Psest_2537 at 2718.816 kb on - strand, within Psest_2537 at 2718.816 kb on - strand, within Psest_2537 at 2718.947 kb on + strand at 2718.948 kb on - strand at 2718.962 kb on - strand at 2718.989 kb on + strand at 2719.028 kb on - strand at 2719.058 kb on + strand at 2719.072 kb on - strand at 2719.097 kb on + strand at 2719.097 kb on + strand at 2719.097 kb on + strand at 2719.097 kb on + strand at 2719.097 kb on + strand at 2719.097 kb on + strand at 2719.097 kb on + strand at 2719.098 kb on - strand at 2719.098 kb on - strand at 2719.098 kb on - strand at 2719.098 kb on - strand at 2719.098 kb on - strand at 2719.098 kb on - strand at 2719.098 kb on - strand at 2719.256 kb on - strand, within Psest_2538 at 2719.313 kb on + strand, within Psest_2538 at 2719.774 kb on + strand at 2719.775 kb on - strand at 2719.892 kb on - strand at 2719.940 kb on - strand, within Psest_2539
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose defined 30C timecourse1 timepoint 3 remove 2,717,423 - +0.1 2,717,573 - -0.3 2,717,674 + +0.1 2,717,674 + -0.7 2,717,674 + -2.0 2,717,674 + +0.3 2,717,674 + -1.2 2,717,674 + -0.7 2,717,674 + +1.0 2,717,675 - -0.7 2,717,675 - -0.7 2,717,675 - -1.1 2,717,777 + Psest_2537 0.12 -0.4 2,717,810 + Psest_2537 0.15 -0.4 2,717,814 - Psest_2537 0.15 -0.9 2,717,938 - Psest_2537 0.24 -0.6 2,717,938 - Psest_2537 0.24 -1.3 2,718,153 + Psest_2537 0.39 +0.2 2,718,154 - Psest_2537 0.39 +0.1 2,718,154 - Psest_2537 0.39 -1.3 2,718,254 + Psest_2537 0.47 -0.1 2,718,254 + Psest_2537 0.47 -0.3 2,718,254 + Psest_2537 0.47 -1.3 2,718,254 + Psest_2537 0.47 -1.0 2,718,254 + Psest_2537 0.47 -0.6 2,718,255 - Psest_2537 0.47 -0.6 2,718,255 - Psest_2537 0.47 -0.7 2,718,255 - Psest_2537 0.47 -0.7 2,718,255 - Psest_2537 0.47 -1.8 2,718,255 - Psest_2537 0.47 -0.7 2,718,255 - Psest_2537 0.47 -1.0 2,718,255 - Psest_2537 0.47 -0.2 2,718,255 - Psest_2537 0.47 -1.0 2,718,255 - Psest_2537 0.47 -2.6 2,718,255 - Psest_2537 0.47 -0.3 2,718,345 - Psest_2537 0.53 -0.9 2,718,345 - Psest_2537 0.53 -1.0 2,718,345 - Psest_2537 0.53 +0.5 2,718,384 + Psest_2537 0.56 -1.7 2,718,385 - Psest_2537 0.56 -0.3 2,718,385 - Psest_2537 0.56 +0.4 2,718,421 - Psest_2537 0.59 -0.1 2,718,421 - Psest_2537 0.59 -1.3 2,718,421 - Psest_2537 0.59 -1.6 2,718,470 + Psest_2537 0.62 +1.1 2,718,626 + Psest_2537 0.74 -0.8 2,718,648 + Psest_2537 0.75 -1.3 2,718,816 - Psest_2537 0.87 -0.8 2,718,816 - Psest_2537 0.87 +0.8 2,718,947 + +0.2 2,718,948 - -0.1 2,718,962 - -0.0 2,718,989 + +0.3 2,719,028 - -0.4 2,719,058 + -0.1 2,719,072 - +0.2 2,719,097 + +0.2 2,719,097 + -0.9 2,719,097 + -0.1 2,719,097 + -0.3 2,719,097 + +0.1 2,719,097 + -0.3 2,719,097 + -0.4 2,719,098 - +1.0 2,719,098 - +0.8 2,719,098 - -0.3 2,719,098 - -0.7 2,719,098 - +0.6 2,719,098 - -0.1 2,719,098 - -0.4 2,719,256 - Psest_2538 0.21 +1.2 2,719,313 + Psest_2538 0.29 +0.3 2,719,774 + +0.2 2,719,775 - -0.1 2,719,892 - +0.0 2,719,940 - Psest_2539 0.15 -0.4
Or see this region's nucleotide sequence