Experiment: Glucose defined 30C timecourse1 timepoint 3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2527 and Psest_2528 are separated by 12 nucleotides Psest_2528 and Psest_2529 are separated by 3 nucleotides Psest_2529 and Psest_2530 are separated by 0 nucleotides
Psest_2527: Psest_2527 - cytochrome c oxidase, cbb3-type, subunit I, at 2,707,885 to 2,709,312
_2527
Psest_2528: Psest_2528 - cytochrome c oxidase, cbb3-type, subunit II, at 2,709,325 to 2,709,936
_2528
Psest_2529: Psest_2529 - Cbb3-type cytochrome oxidase, subunit 3, at 2,709,940 to 2,710,128
_2529
Psest_2530: Psest_2530 - cytochrome c oxidase, cbb3-type, subunit III, at 2,710,129 to 2,711,046
_2530
Position (kb)
2709
2710
2711 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2708.975 kb on - strand, within Psest_2527 at 2709.070 kb on + strand, within Psest_2527 at 2709.149 kb on - strand, within Psest_2527 at 2709.149 kb on - strand, within Psest_2527 at 2709.244 kb on + strand at 2709.322 kb on + strand at 2709.323 kb on - strand at 2709.341 kb on + strand at 2709.701 kb on - strand, within Psest_2528 at 2709.824 kb on - strand, within Psest_2528 at 2709.905 kb on + strand at 2710.126 kb on + strand at 2710.150 kb on + strand at 2710.150 kb on + strand at 2710.150 kb on + strand at 2710.277 kb on - strand, within Psest_2530 at 2710.416 kb on - strand, within Psest_2530 at 2710.469 kb on - strand, within Psest_2530 at 2710.469 kb on - strand, within Psest_2530 at 2710.478 kb on - strand, within Psest_2530 at 2710.478 kb on - strand, within Psest_2530 at 2710.478 kb on - strand, within Psest_2530 at 2710.739 kb on - strand, within Psest_2530 at 2710.826 kb on + strand, within Psest_2530 at 2710.826 kb on + strand, within Psest_2530 at 2710.827 kb on - strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.892 kb on + strand, within Psest_2530 at 2710.893 kb on - strand, within Psest_2530 at 2710.893 kb on - strand, within Psest_2530 at 2710.893 kb on - strand, within Psest_2530 at 2710.900 kb on + strand, within Psest_2530 at 2711.011 kb on + strand at 2711.011 kb on + strand at 2711.011 kb on + strand at 2711.011 kb on + strand at 2711.102 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose defined 30C timecourse1 timepoint 3 remove 2,708,975 - Psest_2527 0.76 -1.6 2,709,070 + Psest_2527 0.83 -0.2 2,709,149 - Psest_2527 0.89 -2.5 2,709,149 - Psest_2527 0.89 -1.8 2,709,244 + -0.7 2,709,322 + -1.3 2,709,323 - -2.5 2,709,341 + -0.6 2,709,701 - Psest_2528 0.61 -3.8 2,709,824 - Psest_2528 0.82 -3.0 2,709,905 + -0.8 2,710,126 + -0.7 2,710,150 + -2.0 2,710,150 + -2.4 2,710,150 + -2.5 2,710,277 - Psest_2530 0.16 -0.8 2,710,416 - Psest_2530 0.31 -1.0 2,710,469 - Psest_2530 0.37 -0.0 2,710,469 - Psest_2530 0.37 -1.1 2,710,478 - Psest_2530 0.38 -0.7 2,710,478 - Psest_2530 0.38 -0.7 2,710,478 - Psest_2530 0.38 -2.0 2,710,739 - Psest_2530 0.66 -0.7 2,710,826 + Psest_2530 0.76 -1.6 2,710,826 + Psest_2530 0.76 +0.4 2,710,827 - Psest_2530 0.76 -0.8 2,710,892 + Psest_2530 0.83 -0.6 2,710,892 + Psest_2530 0.83 -1.4 2,710,892 + Psest_2530 0.83 -1.9 2,710,892 + Psest_2530 0.83 -0.9 2,710,892 + Psest_2530 0.83 -1.3 2,710,892 + Psest_2530 0.83 -0.7 2,710,892 + Psest_2530 0.83 -1.3 2,710,892 + Psest_2530 0.83 -0.5 2,710,892 + Psest_2530 0.83 -0.8 2,710,893 - Psest_2530 0.83 -0.4 2,710,893 - Psest_2530 0.83 -1.2 2,710,893 - Psest_2530 0.83 -1.5 2,710,900 + Psest_2530 0.84 -0.3 2,711,011 + -1.2 2,711,011 + -0.9 2,711,011 + -1.1 2,711,011 + +1.1 2,711,102 - +0.1
Or see this region's nucleotide sequence