Experiment: Glucose defined 30C timecourse1 timepoint 3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2100 and Psest_2101 are separated by 7 nucleotides Psest_2101 and Psest_2102 are separated by 57 nucleotides
Psest_2100: Psest_2100 - Predicted acyltransferases, at 2,226,970 to 2,228,082
_2100
Psest_2101: Psest_2101 - hypothetical protein, at 2,228,090 to 2,228,416
_2101
Psest_2102: Psest_2102 - 5-methyltetrahydrofolate--homocysteine methyltransferase, at 2,228,474 to 2,232,166
_2102
Position (kb)
2228
2229 Strain fitness (log2 ratio)
-1
0
1
2 at 2227.216 kb on + strand, within Psest_2100 at 2227.216 kb on + strand, within Psest_2100 at 2227.216 kb on + strand, within Psest_2100 at 2227.216 kb on + strand, within Psest_2100 at 2227.216 kb on + strand, within Psest_2100 at 2227.217 kb on - strand, within Psest_2100 at 2227.225 kb on + strand, within Psest_2100 at 2227.225 kb on + strand, within Psest_2100 at 2227.447 kb on + strand, within Psest_2100 at 2227.448 kb on - strand, within Psest_2100 at 2227.448 kb on - strand, within Psest_2100 at 2227.475 kb on + strand, within Psest_2100 at 2227.503 kb on - strand, within Psest_2100 at 2227.511 kb on + strand, within Psest_2100 at 2227.512 kb on - strand, within Psest_2100 at 2227.858 kb on + strand, within Psest_2100 at 2227.859 kb on - strand, within Psest_2100 at 2227.859 kb on - strand, within Psest_2100 at 2227.973 kb on - strand at 2227.978 kb on + strand at 2227.978 kb on + strand at 2227.979 kb on - strand at 2228.080 kb on + strand at 2228.202 kb on + strand, within Psest_2101 at 2228.202 kb on + strand, within Psest_2101 at 2228.202 kb on + strand, within Psest_2101 at 2228.547 kb on + strand at 2228.548 kb on - strand at 2228.589 kb on + strand at 2228.589 kb on + strand at 2228.589 kb on + strand at 2228.590 kb on - strand at 2228.590 kb on - strand at 2228.590 kb on - strand at 2228.590 kb on - strand at 2228.614 kb on - strand at 2228.614 kb on - strand at 2228.766 kb on + strand at 2228.766 kb on + strand at 2228.766 kb on + strand at 2228.766 kb on + strand at 2228.766 kb on + strand at 2228.767 kb on - strand at 2228.767 kb on - strand at 2228.907 kb on + strand, within Psest_2102 at 2228.907 kb on + strand, within Psest_2102 at 2228.908 kb on - strand, within Psest_2102 at 2228.985 kb on + strand, within Psest_2102 at 2228.985 kb on + strand, within Psest_2102 at 2228.985 kb on + strand, within Psest_2102 at 2228.985 kb on + strand, within Psest_2102 at 2228.985 kb on + strand, within Psest_2102 at 2228.985 kb on + strand, within Psest_2102 at 2228.985 kb on + strand, within Psest_2102 at 2228.985 kb on + strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2228.986 kb on - strand, within Psest_2102 at 2229.112 kb on - strand, within Psest_2102 at 2229.112 kb on - strand, within Psest_2102 at 2229.276 kb on + strand, within Psest_2102 at 2229.277 kb on - strand, within Psest_2102 at 2229.324 kb on + strand, within Psest_2102 at 2229.324 kb on + strand, within Psest_2102 at 2229.325 kb on - strand, within Psest_2102 at 2229.325 kb on - strand, within Psest_2102 at 2229.325 kb on - strand, within Psest_2102 at 2229.350 kb on - strand, within Psest_2102 at 2229.397 kb on - strand, within Psest_2102
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose defined 30C timecourse1 timepoint 3 remove 2,227,216 + Psest_2100 0.22 -0.1 2,227,216 + Psest_2100 0.22 -0.1 2,227,216 + Psest_2100 0.22 -0.3 2,227,216 + Psest_2100 0.22 +1.9 2,227,216 + Psest_2100 0.22 -0.5 2,227,217 - Psest_2100 0.22 +0.6 2,227,225 + Psest_2100 0.23 -0.2 2,227,225 + Psest_2100 0.23 -0.3 2,227,447 + Psest_2100 0.43 +0.4 2,227,448 - Psest_2100 0.43 -1.4 2,227,448 - Psest_2100 0.43 -1.1 2,227,475 + Psest_2100 0.45 +0.0 2,227,503 - Psest_2100 0.48 -0.9 2,227,511 + Psest_2100 0.49 +0.4 2,227,512 - Psest_2100 0.49 +0.3 2,227,858 + Psest_2100 0.80 -0.2 2,227,859 - Psest_2100 0.80 +1.0 2,227,859 - Psest_2100 0.80 +0.1 2,227,973 - -0.6 2,227,978 + -0.8 2,227,978 + -0.3 2,227,979 - -0.9 2,228,080 + +0.2 2,228,202 + Psest_2101 0.34 -1.1 2,228,202 + Psest_2101 0.34 +0.3 2,228,202 + Psest_2101 0.34 +0.0 2,228,547 + -1.6 2,228,548 - -0.3 2,228,589 + -0.1 2,228,589 + +0.7 2,228,589 + +1.1 2,228,590 - -0.0 2,228,590 - -0.1 2,228,590 - -0.2 2,228,590 - +1.7 2,228,614 - +0.2 2,228,614 - -0.7 2,228,766 + +0.2 2,228,766 + +0.3 2,228,766 + +0.0 2,228,766 + +0.7 2,228,766 + -0.1 2,228,767 - -0.2 2,228,767 - -0.0 2,228,907 + Psest_2102 0.12 -0.3 2,228,907 + Psest_2102 0.12 -0.5 2,228,908 - Psest_2102 0.12 +1.1 2,228,985 + Psest_2102 0.14 -0.1 2,228,985 + Psest_2102 0.14 -0.6 2,228,985 + Psest_2102 0.14 -0.9 2,228,985 + Psest_2102 0.14 -0.8 2,228,985 + Psest_2102 0.14 +0.0 2,228,985 + Psest_2102 0.14 -0.1 2,228,985 + Psest_2102 0.14 -0.2 2,228,985 + Psest_2102 0.14 +1.1 2,228,986 - Psest_2102 0.14 +0.2 2,228,986 - Psest_2102 0.14 +0.3 2,228,986 - Psest_2102 0.14 -0.3 2,228,986 - Psest_2102 0.14 +0.4 2,228,986 - Psest_2102 0.14 +0.2 2,228,986 - Psest_2102 0.14 +0.9 2,228,986 - Psest_2102 0.14 +0.9 2,228,986 - Psest_2102 0.14 -0.2 2,228,986 - Psest_2102 0.14 +0.4 2,228,986 - Psest_2102 0.14 +0.0 2,228,986 - Psest_2102 0.14 +0.1 2,229,112 - Psest_2102 0.17 -0.6 2,229,112 - Psest_2102 0.17 +0.4 2,229,276 + Psest_2102 0.22 -0.1 2,229,277 - Psest_2102 0.22 -0.2 2,229,324 + Psest_2102 0.23 +0.5 2,229,324 + Psest_2102 0.23 +1.0 2,229,325 - Psest_2102 0.23 -0.0 2,229,325 - Psest_2102 0.23 +0.4 2,229,325 - Psest_2102 0.23 +0.2 2,229,350 - Psest_2102 0.24 +0.1 2,229,397 - Psest_2102 0.25 +0.2
Or see this region's nucleotide sequence