Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1474

Experiment: Glucose defined 30C timecourse1 timepoint 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose defined 30C timecourse1 timepoint 3
1,577,973	+		Psest_1472	0.88	-0.7
1,577,973	+		Psest_1472	0.88	-2.7
1,577,973	+		Psest_1472	0.88	-1.5
1,577,973	+		Psest_1472	0.88	-1.9
1,577,973	+		Psest_1472	0.88	-2.0
1,577,973	+		Psest_1472	0.88	-2.9
1,577,973	+		Psest_1472	0.88	-2.8
1,577,973	+		Psest_1472	0.88	-0.1
1,577,973	+		Psest_1472	0.88	+0.0
1,577,973	+		Psest_1472	0.88	-2.0
1,577,974	-		Psest_1472	0.88	-1.5
1,577,974	-		Psest_1472	0.88	-1.9
1,577,974	-		Psest_1472	0.88	-1.5
1,578,059	-				-1.2
1,578,065	+				-1.3
1,578,065	+				-0.6
1,578,065	+				-1.7
1,578,173	+		Psest_1473	0.17	-4.4
1,578,192	+		Psest_1473	0.20	-4.3
1,578,192	+		Psest_1473	0.20	-3.2
1,578,193	-		Psest_1473	0.20	-3.4
1,578,359	+		Psest_1473	0.46	-3.7
1,578,359	+		Psest_1473	0.46	-5.1
1,578,359	+		Psest_1473	0.46	-7.3
1,578,359	+		Psest_1473	0.46	-3.8
1,578,359	+		Psest_1473	0.46	-5.9
1,578,359	+		Psest_1473	0.46	-4.4
1,578,360	-		Psest_1473	0.46	-4.0
1,578,360	-		Psest_1473	0.46	-1.7
1,578,360	-		Psest_1473	0.46	-5.0
1,578,360	-		Psest_1473	0.46	-3.0
1,578,360	-		Psest_1473	0.46	-4.1
1,578,360	-		Psest_1473	0.46	-2.7
1,578,360	-		Psest_1473	0.46	-3.5
1,578,686	-				-4.2
1,578,691	+				-2.0
1,578,691	+				-3.5
1,578,691	+				-3.7
1,578,691	+				-3.7
1,578,691	+				-4.8
1,578,691	+				-2.3
1,578,691	+				-5.8
1,578,691	+				-3.8
1,578,691	+				-7.0
1,578,692	-				-5.4
1,578,692	-				-2.0
1,578,692	-				-3.0
1,578,692	-				-4.3
1,578,692	-				-4.9
1,578,692	-				-2.1
1,578,692	-				-1.5
1,578,872	+		Psest_1474	0.15	-2.3
1,578,951	-		Psest_1474	0.23	-4.0
1,579,084	+		Psest_1474	0.35	-2.1
1,579,084	+		Psest_1474	0.35	-2.6
1,579,084	+		Psest_1474	0.35	-3.4
1,579,084	+		Psest_1474	0.35	-3.8
1,579,084	+		Psest_1474	0.35	-3.7
1,579,085	-		Psest_1474	0.35	-2.3
1,579,085	-		Psest_1474	0.35	-1.5
1,579,085	-		Psest_1474	0.35	-3.2
1,579,085	-		Psest_1474	0.35	-3.0
1,579,085	-		Psest_1474	0.35	-3.1
1,579,085	-		Psest_1474	0.35	-3.1
1,579,085	-		Psest_1474	0.35	-1.7
1,579,085	-		Psest_1474	0.35	-2.8
1,579,085	-		Psest_1474	0.35	-2.5
1,579,085	-		Psest_1474	0.35	-2.0
1,579,085	-		Psest_1474	0.35	-3.4
1,579,085	-		Psest_1474	0.35	-2.1
1,579,085	-		Psest_1474	0.35	-2.0
1,579,088	+		Psest_1474	0.36	-2.6
1,579,324	+		Psest_1474	0.58	-2.8
1,579,325	-		Psest_1474	0.58	-1.5
1,579,325	-		Psest_1474	0.58	-3.1
1,579,325	-		Psest_1474	0.58	-3.7
1,579,325	-		Psest_1474	0.58	-3.8
1,579,325	-		Psest_1474	0.58	-2.8
1,579,325	-		Psest_1474	0.58	-2.6
1,579,444	+		Psest_1474	0.69	-4.2
1,579,447	+		Psest_1474	0.69	-2.3
1,579,448	-		Psest_1474	0.70	-3.5
1,579,607	-		Psest_1474	0.85	-2.0
1,579,745	-				-3.2
1,579,745	-				-2.3
1,579,745	-				-2.7
1,579,745	-				-2.5
1,579,745	-				-2.7
1,579,745	-				-2.3
1,579,745	-				-4.0
1,579,769	+				-4.2
1,579,769	+				-2.8
1,579,770	-				-4.4
1,579,770	-				-3.5
1,579,770	-				-4.9
1,579,770	-				-3.7
1,579,784	+				-1.7
1,579,784	+				-3.1
1,579,784	+				-3.3
1,579,970	+				-3.9
1,579,970	+				-2.5
1,580,082	+				+0.1
1,580,089	+				-0.5
1,580,090	-				-0.4
1,580,107	+				-0.3
1,580,107	+				-0.4
1,580,107	+				+0.1
1,580,107	+				-0.3
1,580,108	-				-0.1
1,580,108	-				+0.1
1,580,108	-				+0.4
1,580,108	-				-0.2
1,580,149	+				-0.3
1,580,150	-				+0.2
1,580,150	-				+0.4
1,580,150	-				+0.1
1,580,150	-				-0.9
1,580,153	+				-0.5
1,580,225	+				+0.3
1,580,386	+		Psest_1475	0.23	+0.9
1,580,387	-		Psest_1475	0.23	-0.5
1,580,387	-		Psest_1475	0.23	+0.6
1,580,390	+		Psest_1475	0.24	-0.6
1,580,390	+		Psest_1475	0.24	-0.1
1,580,390	+		Psest_1475	0.24	-0.3
1,580,391	-		Psest_1475	0.24	-0.3
1,580,391	-		Psest_1475	0.24	-0.4
1,580,411	-		Psest_1475	0.26	-0.1
1,580,668	+		Psest_1475	0.50	-0.2
1,580,702	+		Psest_1475	0.53	+0.2