Strain Fitness in Shewanella oneidensis MR-1 around SO4212

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
4,385,937	-				-2.6
4,385,986	-		SO4212	0.14	+0.9
4,386,039	-		SO4212	0.20	-1.2
4,386,296	+		SO4212	0.48	-1.7
4,386,304	-		SO4212	0.49	-1.2
4,386,359	+		SO4212	0.55	-2.1
4,386,569	-		SO4212	0.78	+0.4
4,386,624	-		SO4212	0.85	-0.9
4,386,624	-		SO4212	0.85	-1.4
4,386,649	-		SO4212	0.87	-1.0
4,386,676	+				+0.5
4,386,760	-				-0.5
4,387,080	+		SO4213	0.65	-1.1
4,387,095	+		SO4213	0.68	-2.7
4,387,128	+		SO4213	0.76	-3.5