Strain Fitness in Shewanella oneidensis MR-1 around SO1347

Experiment: Gentamicin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.005 mg/ml
1,403,034	+	lepA	SO1346	0.56	+0.1
1,403,034	+	lepA	SO1346	0.56	-0.2
1,403,067	+	lepA	SO1346	0.57	+0.1
1,403,628	+	lepA	SO1346	0.89	+0.2
1,403,693	+				-0.1
1,403,693	+				-1.1
1,403,878	+				-1.2
1,404,156	+	lepB	SO1347	0.16	-2.3
1,404,445	+	lepB	SO1347	0.48	-2.1
1,404,467	+	lepB	SO1347	0.50	-3.2
1,404,559	+	lepB	SO1347	0.60	-2.1
1,404,608	+	lepB	SO1347	0.65	-3.7
1,404,764	+	lepB	SO1347	0.82	-3.3
1,404,875	+				-1.1