Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0974

Experiment: Glucose defined 30C timecourse1 timepoint 2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_0973 and Psest_0974 are separated by 10 nucleotidesPsest_0974 and Psest_0975 are separated by 65 nucleotides Psest_0973: Psest_0973 - dihydropteroate synthase, at 1,056,873 to 1,057,724 _0973 Psest_0974: Psest_0974 - phosphoglucosamine mutase, at 1,057,735 to 1,059,072 _0974 Psest_0975: Psest_0975 - triosephosphate isomerase, at 1,059,138 to 1,059,893 _0975 Position (kb) 1057 1058 1059 1060Strain fitness (log2 ratio) -1 0 1at 1056.742 kb on + strandat 1056.742 kb on + strandat 1056.743 kb on - strandat 1056.788 kb on - strandat 1056.877 kb on + strandat 1056.878 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glucose defined 30C timecourse1 timepoint 2
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1,056,742 + -0.8
1,056,742 + +0.1
1,056,743 - -0.6
1,056,788 - +0.0
1,056,877 + -0.5
1,056,878 - -1.1

Or see this region's nucleotide sequence