Experiment: Glucose defined 30C timecourse1 timepoint 2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4090 and Psest_4091 overlap by 4 nucleotides Psest_4091 and Psest_4092 are separated by 10 nucleotides Psest_4092 and Psest_4093 are separated by 59 nucleotides
Psest_4090: Psest_4090 - diaminobutyrate acetyltransferase, at 4,266,881 to 4,267,462
_4090
Psest_4091: Psest_4091 - diaminobutyrate--2-oxoglutarate aminotransferase, at 4,267,459 to 4,268,736
_4091
Psest_4092: Psest_4092 - Ectoine synthase., at 4,268,747 to 4,269,148
_4092
Psest_4093: Psest_4093 - ectoine hydroxylase, at 4,269,208 to 4,270,125
_4093
Position (kb) 4267
4268
4269 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4266.560 kb on + strand at 4266.561 kb on - strand at 4266.561 kb on - strand at 4266.561 kb on - strand at 4266.561 kb on - strand at 4266.739 kb on - strand at 4266.739 kb on - strand at 4266.821 kb on + strand at 4266.822 kb on - strand at 4266.822 kb on - strand at 4266.823 kb on + strand at 4266.823 kb on + strand at 4266.824 kb on - strand at 4266.824 kb on - strand at 4266.824 kb on - strand at 4266.824 kb on - strand at 4266.824 kb on - strand at 4266.824 kb on - strand at 4266.825 kb on + strand at 4266.825 kb on + strand at 4266.826 kb on - strand at 4266.978 kb on - strand, within Psest_4090 at 4266.978 kb on - strand, within Psest_4090 at 4267.031 kb on + strand, within Psest_4090 at 4267.032 kb on - strand, within Psest_4090 at 4267.403 kb on + strand, within Psest_4090 at 4267.434 kb on + strand at 4267.434 kb on + strand at 4267.434 kb on + strand at 4267.434 kb on + strand at 4267.435 kb on - strand at 4267.435 kb on - strand at 4267.435 kb on - strand at 4267.435 kb on - strand at 4267.494 kb on + strand at 4267.494 kb on + strand at 4267.494 kb on + strand at 4267.494 kb on + strand at 4267.495 kb on - strand at 4267.495 kb on - strand at 4267.495 kb on - strand at 4267.499 kb on - strand at 4267.499 kb on - strand at 4267.499 kb on - strand at 4267.570 kb on + strand at 4267.571 kb on - strand at 4267.571 kb on - strand at 4267.571 kb on - strand at 4267.571 kb on - strand at 4267.606 kb on + strand, within Psest_4091 at 4267.607 kb on - strand, within Psest_4091 at 4267.648 kb on + strand, within Psest_4091 at 4267.648 kb on + strand, within Psest_4091 at 4267.648 kb on + strand, within Psest_4091 at 4267.649 kb on - strand, within Psest_4091 at 4267.687 kb on + strand, within Psest_4091 at 4267.687 kb on + strand, within Psest_4091 at 4267.687 kb on + strand, within Psest_4091 at 4267.687 kb on + strand, within Psest_4091 at 4267.687 kb on + strand, within Psest_4091 at 4267.687 kb on + strand, within Psest_4091 at 4267.687 kb on + strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.688 kb on - strand, within Psest_4091 at 4267.972 kb on + strand, within Psest_4091 at 4267.972 kb on + strand, within Psest_4091 at 4267.972 kb on + strand, within Psest_4091 at 4267.972 kb on + strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4267.973 kb on - strand, within Psest_4091 at 4268.494 kb on + strand, within Psest_4091 at 4268.740 kb on - strand at 4268.740 kb on - strand at 4268.740 kb on - strand at 4268.879 kb on + strand, within Psest_4092 at 4268.879 kb on + strand, within Psest_4092 at 4268.879 kb on + strand, within Psest_4092 at 4268.879 kb on + strand, within Psest_4092 at 4268.879 kb on + strand, within Psest_4092 at 4268.880 kb on - strand, within Psest_4092 at 4268.880 kb on - strand, within Psest_4092 at 4268.930 kb on + strand, within Psest_4092 at 4268.931 kb on - strand, within Psest_4092 at 4268.981 kb on + strand, within Psest_4092 at 4268.982 kb on - strand, within Psest_4092 at 4268.982 kb on - strand, within Psest_4092 at 4268.982 kb on - strand, within Psest_4092 at 4268.982 kb on - strand, within Psest_4092 at 4268.982 kb on - strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.005 kb on + strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.006 kb on - strand, within Psest_4092 at 4269.123 kb on - strand at 4269.203 kb on + strand at 4269.203 kb on + strand at 4269.203 kb on + strand at 4269.203 kb on + strand at 4269.203 kb on + strand at 4269.203 kb on + strand at 4269.216 kb on + strand at 4269.217 kb on - strand at 4269.217 kb on - strand at 4269.589 kb on + strand, within Psest_4093 at 4269.589 kb on + strand, within Psest_4093 at 4269.590 kb on - strand, within Psest_4093 at 4269.644 kb on - strand, within Psest_4093
Per-strain Table
Position Strand Gene LocusTag Fraction Glucose defined 30C timecourse1 timepoint 2 remove 4,266,560 + -0.4 4,266,561 - +0.3 4,266,561 - +2.0 4,266,561 - -0.2 4,266,561 - -0.0 4,266,739 - +0.6 4,266,739 - -0.3 4,266,821 + +0.5 4,266,822 - +1.0 4,266,822 - -0.0 4,266,823 + +0.1 4,266,823 + +1.1 4,266,824 - -0.0 4,266,824 - -0.8 4,266,824 - +1.4 4,266,824 - +0.5 4,266,824 - +0.2 4,266,824 - +0.3 4,266,825 + -0.6 4,266,825 + +0.3 4,266,826 - +0.5 4,266,978 - Psest_4090 0.17 +0.3 4,266,978 - Psest_4090 0.17 -0.3 4,267,031 + Psest_4090 0.26 +1.5 4,267,032 - Psest_4090 0.26 -0.2 4,267,403 + Psest_4090 0.90 -0.2 4,267,434 + -0.9 4,267,434 + -0.6 4,267,434 + +1.7 4,267,434 + +0.7 4,267,435 - +0.1 4,267,435 - -0.7 4,267,435 - -0.4 4,267,435 - +0.4 4,267,494 + +1.5 4,267,494 + -0.1 4,267,494 + -0.1 4,267,494 + -0.5 4,267,495 - -0.7 4,267,495 - +0.4 4,267,495 - +0.3 4,267,499 - +0.2 4,267,499 - +0.1 4,267,499 - +0.5 4,267,570 + -0.7 4,267,571 - +0.5 4,267,571 - -0.4 4,267,571 - -0.3 4,267,571 - +0.5 4,267,606 + Psest_4091 0.12 +0.2 4,267,607 - Psest_4091 0.12 +1.1 4,267,648 + Psest_4091 0.15 -0.0 4,267,648 + Psest_4091 0.15 +1.2 4,267,648 + Psest_4091 0.15 +0.2 4,267,649 - Psest_4091 0.15 +0.4 4,267,687 + Psest_4091 0.18 -0.4 4,267,687 + Psest_4091 0.18 -0.2 4,267,687 + Psest_4091 0.18 +2.0 4,267,687 + Psest_4091 0.18 +0.2 4,267,687 + Psest_4091 0.18 -0.6 4,267,687 + Psest_4091 0.18 +0.1 4,267,687 + Psest_4091 0.18 -0.5 4,267,688 - Psest_4091 0.18 +0.2 4,267,688 - Psest_4091 0.18 -0.7 4,267,688 - Psest_4091 0.18 +0.4 4,267,688 - Psest_4091 0.18 -0.8 4,267,688 - Psest_4091 0.18 +0.3 4,267,688 - Psest_4091 0.18 -0.3 4,267,688 - Psest_4091 0.18 +0.1 4,267,688 - Psest_4091 0.18 -0.3 4,267,688 - Psest_4091 0.18 -0.3 4,267,688 - Psest_4091 0.18 +1.0 4,267,688 - Psest_4091 0.18 -0.6 4,267,688 - Psest_4091 0.18 -0.3 4,267,688 - Psest_4091 0.18 +0.2 4,267,688 - Psest_4091 0.18 -0.4 4,267,688 - Psest_4091 0.18 +0.1 4,267,688 - Psest_4091 0.18 +1.1 4,267,688 - Psest_4091 0.18 +1.4 4,267,688 - Psest_4091 0.18 -0.9 4,267,688 - Psest_4091 0.18 -0.5 4,267,688 - Psest_4091 0.18 +0.5 4,267,688 - Psest_4091 0.18 -0.2 4,267,972 + Psest_4091 0.40 -0.3 4,267,972 + Psest_4091 0.40 -0.3 4,267,972 + Psest_4091 0.40 -0.2 4,267,972 + Psest_4091 0.40 +1.0 4,267,973 - Psest_4091 0.40 +0.8 4,267,973 - Psest_4091 0.40 +1.0 4,267,973 - Psest_4091 0.40 +0.2 4,267,973 - Psest_4091 0.40 -0.3 4,267,973 - Psest_4091 0.40 -0.2 4,267,973 - Psest_4091 0.40 -0.3 4,267,973 - Psest_4091 0.40 +0.7 4,267,973 - Psest_4091 0.40 +0.1 4,267,973 - Psest_4091 0.40 -0.7 4,268,494 + Psest_4091 0.81 +0.5 4,268,740 - -0.0 4,268,740 - +0.5 4,268,740 - -1.3 4,268,879 + Psest_4092 0.33 +0.2 4,268,879 + Psest_4092 0.33 -0.0 4,268,879 + Psest_4092 0.33 +0.1 4,268,879 + Psest_4092 0.33 +0.8 4,268,879 + Psest_4092 0.33 -0.5 4,268,880 - Psest_4092 0.33 -0.5 4,268,880 - Psest_4092 0.33 -0.7 4,268,930 + Psest_4092 0.46 -0.0 4,268,931 - Psest_4092 0.46 +0.5 4,268,981 + Psest_4092 0.58 -1.0 4,268,982 - Psest_4092 0.58 +1.0 4,268,982 - Psest_4092 0.58 -2.0 4,268,982 - Psest_4092 0.58 +0.1 4,268,982 - Psest_4092 0.58 -0.4 4,268,982 - Psest_4092 0.58 +2.0 4,269,005 + Psest_4092 0.64 -0.0 4,269,005 + Psest_4092 0.64 -0.2 4,269,005 + Psest_4092 0.64 +0.1 4,269,005 + Psest_4092 0.64 -2.7 4,269,005 + Psest_4092 0.64 -0.0 4,269,005 + Psest_4092 0.64 -0.3 4,269,005 + Psest_4092 0.64 +0.4 4,269,005 + Psest_4092 0.64 -0.5 4,269,005 + Psest_4092 0.64 -0.0 4,269,005 + Psest_4092 0.64 -0.0 4,269,005 + Psest_4092 0.64 -0.4 4,269,005 + Psest_4092 0.64 -1.2 4,269,005 + Psest_4092 0.64 -0.0 4,269,005 + Psest_4092 0.64 -0.9 4,269,005 + Psest_4092 0.64 -0.9 4,269,006 - Psest_4092 0.64 +1.0 4,269,006 - Psest_4092 0.64 -2.5 4,269,006 - Psest_4092 0.64 +0.5 4,269,006 - Psest_4092 0.64 -0.0 4,269,006 - Psest_4092 0.64 +0.7 4,269,006 - Psest_4092 0.64 -0.2 4,269,006 - Psest_4092 0.64 -0.7 4,269,006 - Psest_4092 0.64 -0.0 4,269,006 - Psest_4092 0.64 -0.3 4,269,123 - +0.3 4,269,203 + -0.0 4,269,203 + +0.3 4,269,203 + +0.6 4,269,203 + -1.0 4,269,203 + +0.2 4,269,203 + +0.2 4,269,216 + -0.2 4,269,217 - -0.1 4,269,217 - +0.1 4,269,589 + Psest_4093 0.42 -0.4 4,269,589 + Psest_4093 0.42 +0.2 4,269,590 - Psest_4093 0.42 +0.4 4,269,644 - Psest_4093 0.47 -0.6
Or see this region's nucleotide sequence