Experiment: m.b. Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_235 and HP15_236 are separated by 217 nucleotides HP15_236 and HP15_237 are separated by 74 nucleotides
HP15_235: HP15_235 - UbiD family decarboxylase, at 219,739 to 221,226
_235
HP15_236: HP15_236 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 221,444 to 222,232
_236
HP15_237: HP15_237 - HemY domain protein, at 222,307 to 223,548
_237
Position (kb) 221
222
223 Strain fitness (log2 ratio) -1
0
1
2 at 221.233 kb on - strand at 221.320 kb on + strand at 221.332 kb on - strand at 221.539 kb on + strand, within HP15_236 at 221.570 kb on - strand, within HP15_236 at 221.582 kb on + strand, within HP15_236 at 221.614 kb on + strand, within HP15_236 at 221.624 kb on + strand, within HP15_236 at 221.677 kb on + strand, within HP15_236 at 221.801 kb on + strand, within HP15_236 at 221.872 kb on + strand, within HP15_236 at 221.929 kb on + strand, within HP15_236 at 221.937 kb on - strand, within HP15_236 at 221.937 kb on - strand, within HP15_236 at 221.937 kb on - strand, within HP15_236 at 222.043 kb on + strand, within HP15_236 at 222.048 kb on + strand, within HP15_236 at 222.056 kb on - strand, within HP15_236 at 222.092 kb on + strand, within HP15_236 at 222.150 kb on + strand, within HP15_236 at 222.170 kb on + strand at 222.241 kb on + strand at 222.319 kb on - strand at 222.338 kb on + strand at 222.420 kb on - strand at 222.640 kb on - strand, within HP15_237 at 222.651 kb on - strand, within HP15_237 at 222.665 kb on + strand, within HP15_237 at 222.715 kb on - strand, within HP15_237 at 222.777 kb on + strand, within HP15_237 at 222.843 kb on + strand, within HP15_237 at 222.848 kb on + strand, within HP15_237 at 222.920 kb on + strand, within HP15_237 at 223.035 kb on + strand, within HP15_237 at 223.071 kb on + strand, within HP15_237 at 223.103 kb on - strand, within HP15_237 at 223.108 kb on + strand, within HP15_237 at 223.108 kb on + strand, within HP15_237 at 223.108 kb on + strand, within HP15_237 at 223.189 kb on + strand, within HP15_237
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.32 mM remove 221,233 - +0.5 221,320 + -0.2 221,332 - +0.5 221,539 + HP15_236 0.12 +1.6 221,570 - HP15_236 0.16 +1.1 221,582 + HP15_236 0.17 +1.1 221,614 + HP15_236 0.22 +1.2 221,624 + HP15_236 0.23 +1.9 221,677 + HP15_236 0.30 +1.3 221,801 + HP15_236 0.45 +1.2 221,872 + HP15_236 0.54 +1.1 221,929 + HP15_236 0.61 +1.7 221,937 - HP15_236 0.62 +0.6 221,937 - HP15_236 0.62 +1.3 221,937 - HP15_236 0.62 +1.0 222,043 + HP15_236 0.76 +1.7 222,048 + HP15_236 0.77 +1.1 222,056 - HP15_236 0.78 +1.5 222,092 + HP15_236 0.82 +1.3 222,150 + HP15_236 0.89 +1.1 222,170 + +1.1 222,241 + -0.3 222,319 - +0.4 222,338 + +1.0 222,420 - -0.1 222,640 - HP15_237 0.27 +0.5 222,651 - HP15_237 0.28 -1.2 222,665 + HP15_237 0.29 -0.3 222,715 - HP15_237 0.33 +0.2 222,777 + HP15_237 0.38 +0.1 222,843 + HP15_237 0.43 -1.0 222,848 + HP15_237 0.44 -0.1 222,920 + HP15_237 0.49 -1.3 223,035 + HP15_237 0.59 +0.1 223,071 + HP15_237 0.62 -0.7 223,103 - HP15_237 0.64 -0.7 223,108 + HP15_237 0.64 +0.3 223,108 + HP15_237 0.64 +0.1 223,108 + HP15_237 0.64 +0.6 223,189 + HP15_237 0.71 +0.1
Or see this region's nucleotide sequence