Strain Fitness in Shewanella oneidensis MR-1 around SO4728

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
4,931,880	+				+1.0
4,931,995	+				+0.0
4,932,003	-				-0.1
4,932,039	+				-0.4
4,932,154	-		SO4727	0.14	-0.7
4,932,159	-		SO4727	0.15	+1.4
4,932,227	+		SO4727	0.26	+1.2
4,932,315	-		SO4727	0.39	+1.1
4,932,331	+		SO4727	0.42	-0.0
4,932,379	-		SO4727	0.49	+1.1
4,932,389	-		SO4727	0.51	-2.2
4,932,512	-		SO4727	0.70	+0.3
4,932,530	-		SO4727	0.73	+1.1
4,932,567	-		SO4727	0.79	-1.5
4,932,828	-				+4.9
4,932,833	-				+4.3
4,932,876	-		SO4728	0.16	+3.9
4,932,928	+		SO4728	0.26	+2.9
4,932,931	-		SO4728	0.26	+4.6
4,933,001	+		SO4728	0.39	+4.3
4,933,252	+		SO4728	0.85	-0.6
4,933,309	+				-3.5
4,933,484	-		SO4729	0.17	+0.3
4,933,484	-		SO4729	0.17	-1.9
4,933,634	-		SO4729	0.49	-0.7
4,933,683	-		SO4729	0.59	+0.6
4,933,741	+		SO4729	0.72	+1.4
4,933,749	-		SO4729	0.74	+0.5
4,933,762	-		SO4729	0.76	-1.9
4,933,764	-		SO4729	0.77	-0.4
4,933,796	-		SO4729	0.84	+2.2
4,933,831	+				+0.3
4,933,839	-				+0.1
4,933,924	+				+1.1
4,934,069	-				-1.7
4,934,076	+				-2.1
4,934,128	+				-0.1
4,934,128	+				+0.3
4,934,136	-				+1.0
4,934,136	-				-3.2
4,934,136	-				-0.7
4,934,136	-				+1.9
4,934,136	-				-3.6
4,934,136	-				+0.0
4,934,195	+				-1.3
4,934,203	-				+0.1
4,934,225	-				-0.1
4,934,273	+	hemN	SO4730	0.10	-0.7