Strain Fitness in Shewanella oneidensis MR-1 around SO4372

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
4,564,790	-		SO4371	0.30	-0.2
4,564,807	+		SO4371	0.31	-2.5
4,564,880	+		SO4371	0.36	-2.0
4,564,888	-		SO4371	0.37	-0.2
4,565,007	-		SO4371	0.46	-2.0
4,565,289	-		SO4371	0.66	+0.0
4,565,328	-		SO4371	0.69	-4.8
4,565,398	-		SO4371	0.74	+0.3
4,565,469	+		SO4371	0.79	-2.9
4,565,532	-		SO4371	0.84	-2.6
4,565,555	-		SO4371	0.86	-3.1
4,565,613	+				-0.9
4,565,695	+				-1.6
4,565,701	+				-2.8
4,565,709	-				-0.9
4,565,709	-				+0.6
4,565,803	-		SO4372	0.16	-3.5
4,565,867	+		SO4372	0.33	-1.9
4,565,898	+		SO4372	0.42	-1.9
4,565,906	-		SO4372	0.44	-0.5
4,565,906	-		SO4372	0.44	-2.4
4,566,143	+				-3.3
4,566,217	+				-1.9
4,566,242	+				-2.9
4,566,304	-				-1.0
4,566,304	-				-1.9
4,566,311	+				-0.9
4,566,319	-				-2.5
4,566,405	+		SO4373	0.14	-1.3
4,566,480	-		SO4373	0.19	-1.2
4,566,484	+		SO4373	0.19	-0.8
4,566,632	-		SO4373	0.27	-3.3
4,566,790	+		SO4373	0.36	-2.8
4,566,812	-		SO4373	0.37	-0.9
4,566,819	+		SO4373	0.38	-1.4
4,566,827	-		SO4373	0.38	-3.0
4,566,827	-		SO4373	0.38	-0.6
4,567,097	+		SO4373	0.53	-3.8