Strain Fitness in Shewanella oneidensis MR-1 around SO4251

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
4,427,375	+	dut	SO4250	0.16	-2.7
4,427,514	+	dut	SO4250	0.46	-1.0
4,427,514	+	dut	SO4250	0.46	-0.8
4,427,514	+	dut	SO4250	0.46	-0.2
4,427,514	+	dut	SO4250	0.46	-2.9
4,427,514	+	dut	SO4250	0.46	-2.4
4,427,519	+	dut	SO4250	0.47	-2.3
4,427,522	-	dut	SO4250	0.48	-1.3
4,427,522	-	dut	SO4250	0.48	-1.4
4,427,522	-	dut	SO4250	0.48	-1.8
4,427,546	-	dut	SO4250	0.53	-2.4
4,427,622	+	dut	SO4250	0.69	-0.5
4,427,665	-	dut	SO4250	0.79	-2.9
4,427,791	-				-3.2
4,427,795	+				-0.0
4,427,840	-				-2.9
4,427,840	-				+1.4
4,427,863	+		SO4251	0.12	-1.4
4,427,908	+		SO4251	0.19	-1.7
4,427,993	+		SO4251	0.34	-3.5
4,428,036	+		SO4251	0.41	-1.8
4,428,057	+		SO4251	0.44	-1.5
4,428,232	-		SO4251	0.74	-1.6
4,428,252	+		SO4251	0.77	-0.6
4,428,338	-				-0.7
4,428,655	-				+1.9
4,428,777	+		SO4252	0.13	+0.3
4,428,795	+		SO4252	0.14	-0.4
4,428,803	-		SO4252	0.14	-2.8
4,428,805	+		SO4252	0.14	-0.8
4,428,837	-		SO4252	0.16	-0.3
4,428,871	-		SO4252	0.18	+0.6
4,428,985	+		SO4252	0.23	+1.3
4,429,036	+		SO4252	0.26	+1.9
4,429,036	+		SO4252	0.26	+0.3
4,429,039	-		SO4252	0.26	+0.8
4,429,044	-		SO4252	0.26	-0.8
4,429,044	-		SO4252	0.26	-0.7
4,429,104	-		SO4252	0.29	-1.9
4,429,151	+		SO4252	0.32	-1.2
4,429,189	-		SO4252	0.34	-0.3
4,429,200	-		SO4252	0.34	+0.8
4,429,229	+		SO4252	0.36	+0.3
4,429,255	+		SO4252	0.37	+3.7
4,429,313	-		SO4252	0.40	+0.2
4,429,342	-		SO4252	0.41	-2.3