Strain Fitness in Shewanella oneidensis MR-1 around SO3954

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
4,096,293	-		SO3952	0.76	+5.0
4,096,293	-		SO3952	0.76	+3.8
4,096,293	-		SO3952	0.76	+4.7
4,096,293	-		SO3952	0.76	+5.1
4,096,293	-		SO3952	0.76	+5.0
4,096,431	-				+0.1
4,096,673	-		SO3953	0.26	+5.3
4,096,864	-		SO3953	0.51	+5.1
4,096,864	-		SO3953	0.51	+4.4
4,096,930	-		SO3953	0.59	+5.5
4,096,942	-		SO3953	0.61	+5.1
4,097,043	-		SO3953	0.74	+5.9
4,097,043	-		SO3953	0.74	+5.2
4,097,043	-		SO3953	0.74	+4.8
4,097,043	-		SO3953	0.74	+6.3
4,097,136	-		SO3953	0.85	+5.7
4,097,282	+				+7.1
4,097,317	-				+4.5
4,097,319	+				+6.5
4,097,342	+		SO3954	0.12	+6.7
4,097,349	-		SO3954	0.12	+4.4
4,097,367	+		SO3954	0.15	+6.5
4,097,373	-		SO3954	0.15	+3.3
4,097,442	-		SO3954	0.24	+6.1
4,097,473	-		SO3954	0.28	+4.6
4,097,473	-		SO3954	0.28	+4.9
4,097,598	+		SO3954	0.43	+7.0
4,097,611	-		SO3954	0.44	+5.3
4,097,682	-		SO3954	0.53	+5.1
4,097,720	+		SO3954	0.58	+6.7
4,097,721	+		SO3954	0.58	+5.8
4,097,729	-		SO3954	0.59	+4.3
4,097,771	-		SO3954	0.64	+5.3
4,097,922	+		SO3954	0.82	+7.1
4,098,114	-				+0.5
4,098,162	+				+1.3
4,098,171	+				+1.7
4,098,220	+				-0.9
4,098,304	+				-3.3
4,098,410	+				+0.1
4,098,436	+				-2.2
4,098,455	+				-0.3
4,098,507	+				-0.8
4,098,585	+				-1.3