Strain Fitness in Shewanella oneidensis MR-1 around SO3763

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,911,391	+				-0.3
3,911,399	-				-0.6
3,911,579	+		SO3762	0.12	+1.3
3,911,612	-		SO3762	0.15	-0.2
3,911,641	+		SO3762	0.19	+1.2
3,911,760	+		SO3762	0.32	-2.0
3,911,768	-		SO3762	0.33	-3.8
3,911,909	+		SO3762	0.48	+0.5
3,911,909	+		SO3762	0.48	-1.2
3,911,917	-		SO3762	0.49	-2.7
3,911,917	-		SO3762	0.49	-2.5
3,911,922	-		SO3762	0.50	+0.4
3,911,951	-		SO3762	0.53	+1.3
3,911,964	-		SO3762	0.54	+0.8
3,911,980	+		SO3762	0.56	-2.9
3,912,042	+		SO3762	0.63	-1.6
3,912,219	+		SO3762	0.83	-1.0
3,912,227	+		SO3762	0.84	-0.6
3,912,235	-		SO3762	0.85	+0.3
3,912,333	+				-2.4
3,912,398	-				-1.7
3,912,460	-				-2.1
3,912,524	-				-0.3
3,912,659	+		SO3763	0.16	+1.3
3,912,736	+		SO3763	0.21	-1.4
3,912,769	-		SO3763	0.23	-0.4
3,912,769	-		SO3763	0.23	-0.4
3,912,871	+		SO3763	0.29	-2.2
3,912,871	+		SO3763	0.29	-2.0
3,912,879	-		SO3763	0.29	-1.0
3,912,935	+		SO3763	0.32	-0.7
3,912,943	-		SO3763	0.33	-0.3
3,912,973	+		SO3763	0.34	-0.2
3,912,973	+		SO3763	0.34	-0.9
3,912,973	+		SO3763	0.34	-2.4
3,912,981	-		SO3763	0.35	+0.9
3,912,981	-		SO3763	0.35	-1.0
3,912,981	-		SO3763	0.35	-1.6
3,913,021	+		SO3763	0.37	-2.4
3,913,117	+		SO3763	0.43	-2.7
3,913,163	-		SO3763	0.46	+0.9
3,913,205	+		SO3763	0.48	-2.5
3,913,236	-		SO3763	0.50	-2.5
3,913,236	-		SO3763	0.50	-2.3
3,913,236	-		SO3763	0.50	-0.6
3,913,249	+		SO3763	0.50	-1.8
3,913,249	+		SO3763	0.50	-1.0
3,913,254	+		SO3763	0.51	+0.1
3,913,262	-		SO3763	0.51	-2.1
3,913,365	+		SO3763	0.57	-0.8
3,913,373	-		SO3763	0.58	+2.7
3,913,419	+		SO3763	0.60	+3.3
3,913,431	+		SO3763	0.61	+0.3
3,913,456	+		SO3763	0.62	-1.0
3,913,464	-		SO3763	0.63	-0.8
3,913,500	+		SO3763	0.65	-0.7
3,913,597	-		SO3763	0.71	-1.4
3,913,671	+		SO3763	0.75	+1.9
3,913,690	-		SO3763	0.76	-1.2
3,913,865	+		SO3763	0.86	-4.1
3,914,014	+				-2.3
3,914,281	-		SO3764	0.24	-2.0
3,914,488	-		SO3764	0.74	-1.0
3,914,488	-		SO3764	0.74	-0.5
3,914,513	+		SO3764	0.80	+0.2
3,914,554	+				+0.1
3,914,554	+				-1.1
3,914,554	+				-1.1
3,914,792	+		SO3765	0.27	-1.7
3,914,811	+		SO3765	0.30	+0.4
3,915,011	+		SO3765	0.59	-2.3