Strain Fitness in Shewanella oneidensis MR-1 around SO3681

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,831,311	+		SO3679	0.27	-1.0
3,831,361	+		SO3679	0.41	-0.8
3,831,418	-		SO3679	0.57	-1.1
3,831,500	+		SO3679	0.80	+0.3
3,831,536	+				+1.1
3,831,536	+				-1.7
3,831,541	+				-0.9
3,831,544	-				-0.9
3,831,557	+				-0.6
3,831,565	-				+0.4
3,831,615	+				+0.1
3,831,635	-				-0.2
3,831,641	+				+1.2
3,831,641	+				+0.3
3,831,787	-		SO3680	0.22	+1.2
3,831,804	-		SO3680	0.25	+0.2
3,831,877	-		SO3680	0.42	-1.0
3,831,890	-		SO3680	0.45	-0.5
3,831,890	-		SO3680	0.45	-1.3
3,831,890	-		SO3680	0.45	-0.5
3,831,904	+		SO3680	0.48	-0.4
3,831,904	+		SO3680	0.48	-0.2
3,831,904	+		SO3680	0.48	+2.9
3,831,912	-		SO3680	0.50	-0.2
3,831,951	-		SO3680	0.59	-0.1
3,831,989	-		SO3680	0.67	-1.2
3,832,070	-		SO3680	0.86	+1.7
3,832,112	-				-0.3
3,832,131	+				-0.9
3,832,152	+				+1.3
3,832,157	+				+0.8
3,832,165	-				+1.6
3,832,165	-				-1.2
3,832,165	-				-0.1
3,832,302	-				+0.2
3,832,388	+		SO3681	0.20	+2.1
3,832,426	-		SO3681	0.29	+1.8
3,832,495	+		SO3681	0.45	+1.3
3,832,503	-		SO3681	0.47	+0.1
3,832,503	-		SO3681	0.47	-0.2
3,832,562	+		SO3681	0.60	+1.3
3,832,562	+		SO3681	0.60	+0.9
3,832,562	+		SO3681	0.60	+1.5
3,832,562	+		SO3681	0.60	+2.3
3,832,570	-		SO3681	0.62	+0.0
3,832,570	-		SO3681	0.62	-1.2
3,832,570	-		SO3681	0.62	+1.3
3,832,600	+		SO3681	0.69	-0.2
3,832,600	+		SO3681	0.69	+0.9
3,832,600	+		SO3681	0.69	+1.7
3,832,600	+		SO3681	0.69	-0.3
3,832,608	-		SO3681	0.71	+0.6
3,832,608	-		SO3681	0.71	+0.2
3,832,612	+		SO3681	0.72	-1.8
3,832,666	+		SO3681	0.84	-2.3
3,832,666	+		SO3681	0.84	+1.1
3,832,764	-				-1.4
3,833,052	-		SO3682	0.75	-1.9
3,833,120	-				-0.4
3,833,192	+				+2.0
3,833,199	+				+1.1
3,833,364	-				+0.1
3,833,406	-				+1.1
3,833,431	+				-1.5
3,833,463	+				-0.7
3,833,546	+		SO3683	0.14	-1.9
3,833,669	-		SO3683	0.22	-1.7
3,833,671	+		SO3683	0.22	+0.5