Strain Fitness in Shewanella oneidensis MR-1 around SO3595

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,756,402	+		SO3593	0.24	+0.7
3,756,408	-		SO3593	0.25	+1.3
3,756,476	+		SO3593	0.43	+0.5
3,756,507	-		SO3593	0.51	-3.3
3,756,552	+		SO3593	0.63	-1.9
3,756,589	-		SO3593	0.72	+1.3
3,756,658	+				-3.7
3,756,658	+				-1.0
3,756,666	-				-0.6
3,756,670	+				+0.0
3,756,676	+				+1.9
3,756,721	+				-0.3
3,756,820	+		SO3594	0.18	-1.6
3,756,820	+		SO3594	0.18	-1.6
3,756,820	+		SO3594	0.18	-0.4
3,756,820	+		SO3594	0.18	-0.7
3,756,820	+		SO3594	0.18	-1.0
3,756,828	-		SO3594	0.19	-2.4
3,756,828	-		SO3594	0.19	-1.4
3,756,828	-		SO3594	0.19	+0.1
3,756,828	-		SO3594	0.19	+0.9
3,756,828	-		SO3594	0.19	-2.3
3,756,848	-		SO3594	0.22	+0.1
3,756,881	+		SO3594	0.26	-1.3
3,756,881	+		SO3594	0.26	-0.7
3,756,890	+		SO3594	0.27	-0.4
3,756,890	+		SO3594	0.27	+0.5
3,756,890	+		SO3594	0.27	-1.7
3,756,890	+		SO3594	0.27	+0.3
3,756,898	-		SO3594	0.29	-0.5
3,756,898	-		SO3594	0.29	+0.7
3,756,898	-		SO3594	0.29	-2.6
3,756,898	-		SO3594	0.29	-2.6
3,756,898	-		SO3594	0.29	-2.7
3,756,937	-		SO3594	0.34	-1.0
3,756,937	-		SO3594	0.34	-1.9
3,756,937	-		SO3594	0.34	-2.9
3,756,945	-		SO3594	0.35	-1.0
3,756,947	-		SO3594	0.35	-1.3
3,757,008	+		SO3594	0.44	-2.3
3,757,022	+		SO3594	0.46	+1.3
3,757,099	-		SO3594	0.57	-0.6
3,757,113	+		SO3594	0.59	-1.2
3,757,113	+		SO3594	0.59	-1.1
3,757,113	+		SO3594	0.59	-2.3
3,757,113	+		SO3594	0.59	-0.2
3,757,121	-		SO3594	0.60	-3.5
3,757,216	+		SO3594	0.73	-0.5
3,757,222	+		SO3594	0.74	-2.0
3,757,301	+		SO3594	0.85	+1.1
3,757,301	+		SO3594	0.85	-2.3
3,757,411	-				+2.4
3,757,480	-				+2.6
3,757,714	-		SO3595	0.27	+3.3
3,757,714	-		SO3595	0.27	+3.6
3,757,714	-		SO3595	0.27	-1.2
3,757,778	+		SO3595	0.31	+2.5
3,757,829	+		SO3595	0.35	+2.6
3,757,844	+		SO3595	0.36	+2.2
3,757,852	-				+3.3
3,757,945	+		SO3595	0.44	-0.9
3,757,959	+		SO3595	0.45	+2.5
3,757,989	+		SO3595	0.47	+3.4
3,757,997	-		SO3595	0.48	+2.7
3,758,022	+		SO3595	0.50	+0.4
3,758,066	-		SO3595	0.53	+0.7
3,758,094	+		SO3595	0.55	+2.9
3,758,102	-		SO3595	0.56	+2.8
3,758,161	+		SO3595	0.60	+1.1
3,758,161	+		SO3595	0.60	+2.6
3,758,236	-		SO3595	0.66	+2.5
3,758,238	-		SO3595	0.66	+0.8
3,758,392	+		SO3595	0.78	+3.8
3,758,458	+		SO3595	0.83	+2.7
3,758,466	-		SO3595	0.83	+1.6
3,758,511	+		SO3595	0.87	+2.3
3,758,598	-				+2.0
3,758,640	-				+2.6
3,758,660	-				+3.0
3,758,697	+				+0.5
3,758,721	+				-1.2
3,758,729	-				+0.0
3,758,734	-				+0.0
3,758,821	+				-1.5
3,758,875	-		SO3596	0.11	-0.3
3,758,882	+		SO3596	0.14	-0.7
3,758,919	+		SO3596	0.26	-1.9
3,759,069	+		SO3596	0.74	-0.7
3,759,279	-				-0.5
3,759,337	+				+0.3
3,759,349	+				+1.6
3,759,349	+				+1.1
3,759,349	+				-0.2
3,759,357	-		SO3597	0.11	+1.8
3,759,357	-		SO3597	0.11	+0.3
3,759,399	-		SO3597	0.19	-2.0
3,759,430	+		SO3597	0.25	+0.0
3,759,438	-		SO3597	0.26	+0.5
3,759,438	-		SO3597	0.26	-1.5
3,759,450	+		SO3597	0.29	-2.2
3,759,460	+		SO3597	0.31	-0.0
3,759,562	+		SO3597	0.50	+0.7
3,759,569	+		SO3597	0.51	-1.8
3,759,603	+		SO3597	0.57	+1.8
3,759,633	+		SO3597	0.63	+0.7
3,759,639	+		SO3597	0.64	-0.4
3,759,650	+		SO3597	0.66	-1.5
3,759,658	-		SO3597	0.67	-1.5