Strain Fitness in Shewanella oneidensis MR-1 around SO3256

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,391,616	+				+0.9
3,391,667	+				+0.2
3,391,731	+	flgM	SO3254	0.14	-1.2
3,391,745	+	flgM	SO3254	0.18	-2.4
3,391,745	+	flgM	SO3254	0.18	+0.5
3,391,745	+	flgM	SO3254	0.18	-0.4
3,391,745	+	flgM	SO3254	0.18	+0.2
3,391,745	+	flgM	SO3254	0.18	+0.5
3,391,745	+	flgM	SO3254	0.18	-0.9
3,391,745	+	flgM	SO3254	0.18	+0.4
3,391,745	+	flgM	SO3254	0.18	-2.7
3,391,745	+	flgM	SO3254	0.18	+0.9
3,391,745	+	flgM	SO3254	0.18	-0.5
3,391,845	+	flgM	SO3254	0.49	-0.3
3,391,845	+	flgM	SO3254	0.49	-0.7
3,391,987	+				-0.8
3,392,042	+				-2.0
3,392,253	+	flgN	SO3255	0.55	-1.3
3,392,266	-	flgN	SO3255	0.58	-0.1
3,392,266	-	flgN	SO3255	0.58	+1.6
3,392,336	+	flgN	SO3255	0.75	-0.3
3,392,341	+	flgN	SO3255	0.76	+1.9
3,392,349	-	flgN	SO3255	0.78	-0.8
3,392,394	+	flgN	SO3255	0.88	+0.8
3,392,529	-				+0.9
3,392,530	+				-0.4
3,392,540	+				-1.4
3,392,548	-				+0.4
3,392,548	-				-2.0
3,392,548	-				-1.9
3,392,685	+		SO3256	0.28	-0.2
3,392,742	+		SO3256	0.40	+1.0
3,392,891	-		SO3256	0.74	-0.9
3,392,904	+		SO3256	0.76	-0.0
3,392,912	-		SO3256	0.78	-0.1
3,392,912	-		SO3256	0.78	+0.3
3,392,912	-		SO3256	0.78	+0.3
3,393,089	+		SO3257	0.13	+0.8
3,393,101	+		SO3257	0.15	-1.4
3,393,160	-		SO3257	0.24	+0.2
3,393,331	-		SO3257	0.51	+1.1
3,393,636	-				+0.7
3,393,640	+				+0.3
3,393,648	-				+0.1
3,393,677	-				+1.0
3,393,717	-				+0.4
3,393,758	-				-0.0
3,393,788	-				-1.9
3,393,843	+				-2.8
3,393,861	-				-1.4
3,393,872	-				+0.3
3,393,949	+				+1.9
3,393,957	-				+0.8
3,393,959	+				+1.1
3,393,971	+				-1.9
3,393,979	-				+1.1