Strain Fitness in Shewanella oneidensis MR-1 around SO3197

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,337,781	-		SO3196	0.23	-1.2
3,337,861	-		SO3196	0.30	-0.6
3,337,920	-		SO3196	0.35	-2.2
3,337,977	+		SO3196	0.40	+0.1
3,337,977	+		SO3196	0.40	+1.6
3,337,977	+		SO3196	0.40	-0.7
3,337,977	+		SO3196	0.40	-2.3
3,337,977	+		SO3196	0.40	-1.5
3,337,985	-		SO3196	0.41	-0.9
3,338,010	-		SO3196	0.43	+0.6
3,338,010	-		SO3196	0.43	+0.4
3,338,010	-		SO3196	0.43	-2.1
3,338,010	-		SO3196	0.43	-2.6
3,338,010	-		SO3196	0.43	-2.5
3,338,083	+		SO3196	0.50	-1.8
3,338,207	+		SO3196	0.61	+1.6
3,338,225	+		SO3196	0.63	-0.1
3,338,261	-		SO3196	0.66	+2.1
3,338,265	+		SO3196	0.67	+1.1
3,338,272	-		SO3196	0.67	+0.4
3,338,351	-		SO3196	0.74	-2.8
3,338,596	+				+1.0
3,338,752	+				-0.2
3,338,835	-		SO3197	0.10	+4.9
3,338,868	+		SO3197	0.15	+4.1
3,338,876	-		SO3197	0.16	+4.9
3,338,876	-		SO3197	0.16	+4.5
3,339,095	-		SO3197	0.43	+4.6
3,339,151	+		SO3197	0.51	+4.8
3,339,164	-		SO3197	0.52	+4.9
3,339,252	-		SO3197	0.63	+5.2
3,339,446	+		SO3197	0.88	+4.1
3,339,446	+		SO3197	0.88	+5.9
3,339,465	-				+4.1
3,339,481	-				+5.8
3,339,489	-				+3.7
3,339,518	+				+5.1
3,339,526	-				+5.2
3,339,554	-				-1.5
3,339,629	+				+4.1
3,339,629	+				+4.2
3,339,629	+				+5.1
3,339,629	+				+5.0
3,339,629	+				+3.4
3,339,630	-				-0.5
3,339,637	-				-0.4
3,339,637	-				-0.5
3,339,673	+				+3.7
3,339,688	+				+1.2
3,339,812	-				+0.3
3,339,826	+				-1.5
3,339,839	-				+0.1
3,339,839	-				-0.4
3,339,844	+				-0.5
3,339,852	-				-0.9
3,340,017	+		SO3198	0.14	-0.9
3,340,039	-		SO3198	0.15	-1.5
3,340,290	+		SO3198	0.29	-0.5
3,340,290	+		SO3198	0.29	-0.7
3,340,290	+		SO3198	0.29	+0.6
3,340,290	+		SO3198	0.29	-0.8
3,340,290	+		SO3198	0.29	-2.0
3,340,298	-		SO3198	0.29	+0.7
3,340,298	-		SO3198	0.29	+1.8
3,340,298	-		SO3198	0.29	-1.9
3,340,298	-		SO3198	0.29	+1.1
3,340,298	-		SO3198	0.29	+0.3
3,340,503	+		SO3198	0.41	+0.1