Strain Fitness in Shewanella oneidensis MR-1 around SO3135

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,263,112	-				-2.0
3,263,283	+	dctP	SO3134	0.26	-1.4
3,263,631	+	dctP	SO3134	0.60	+0.6
3,263,641	-	dctP	SO3134	0.61	-0.8
3,263,641	-	dctP	SO3134	0.61	-1.4
3,263,720	-	dctP	SO3134	0.69	-0.5
3,263,821	-	dctP	SO3134	0.79	+1.7
3,263,823	+	dctP	SO3134	0.79	-0.8
3,263,870	+	dctP	SO3134	0.83	+0.6
3,263,870	+	dctP	SO3134	0.83	-2.3
3,263,968	-				+0.2
3,264,078	+				+1.8
3,264,176	-		SO3135	0.11	+0.2
3,264,238	+		SO3135	0.21	-0.8
3,264,238	+		SO3135	0.21	-1.3
3,264,238	+		SO3135	0.21	-2.6
3,264,238	+		SO3135	0.21	+3.1
3,264,244	-		SO3135	0.22	-0.2
3,264,246	-		SO3135	0.22	-0.3
3,264,246	-		SO3135	0.22	-0.8
3,264,246	-		SO3135	0.22	-1.7
3,264,246	-		SO3135	0.22	+1.3
3,264,246	-		SO3135	0.22	+2.0
3,264,246	-		SO3135	0.22	-0.2
3,264,246	-		SO3135	0.22	-1.2
3,264,275	+		SO3135	0.26	+2.7
3,264,283	+		SO3135	0.27	-1.5
3,264,283	+		SO3135	0.27	+0.1
3,264,283	+		SO3135	0.27	-0.7
3,264,283	-		SO3135	0.27	+1.5
3,264,283	-		SO3135	0.27	-1.5
3,264,283	-		SO3135	0.27	-1.0
3,264,283	-		SO3135	0.27	-1.0
3,264,291	-		SO3135	0.29	+0.2
3,264,291	-		SO3135	0.29	-0.1
3,264,291	-		SO3135	0.29	+0.2
3,264,291	-		SO3135	0.29	+0.8
3,264,291	-		SO3135	0.29	-2.0
3,264,309	-		SO3135	0.31	-0.2
3,264,377	-		SO3135	0.42	-1.2
3,264,415	+		SO3135	0.47	-0.1
3,264,447	-		SO3135	0.52	-1.1
3,264,511	+		SO3135	0.62	-2.0
3,264,514	-		SO3135	0.62	-0.8
3,264,546	+		SO3135	0.67	+0.3
3,264,554	-		SO3135	0.68	-1.4
3,264,648	+		SO3135	0.83	+0.5
3,264,700	+				-1.6
3,264,700	+				-0.5
3,264,718	-				-0.5
3,264,725	+				+0.5
3,264,741	+				+0.8
3,264,749	-				-2.0
3,264,766	-				-0.2
3,264,817	-				-1.2
3,264,835	-				+1.4
3,264,882	+				-2.6
3,264,920	-	dctM	SO3136	0.11	-1.2
3,265,012	+	dctM	SO3136	0.18	-2.4
3,265,037	+	dctM	SO3136	0.20	-1.8
3,265,045	-	dctM	SO3136	0.20	-0.4
3,265,045	-	dctM	SO3136	0.20	-3.6
3,265,248	+	dctM	SO3136	0.35	-3.3
3,265,401	+	dctM	SO3136	0.46	+1.4
3,265,483	-	dctM	SO3136	0.52	-0.1
3,265,487	+	dctM	SO3136	0.52	-0.0
3,265,487	+	dctM	SO3136	0.52	-0.3
3,265,564	+	dctM	SO3136	0.57	-2.9
3,265,572	-	dctM	SO3136	0.58	-0.6
3,265,572	-	dctM	SO3136	0.58	+0.1
3,265,590	+	dctM	SO3136	0.59	+1.0
3,265,638	-	dctM	SO3136	0.63	+0.3
3,265,667	-	dctM	SO3136	0.65	+1.4
3,265,677	+	dctM	SO3136	0.66	-1.8
3,265,677	-	dctM	SO3136	0.66	-1.4
3,265,684	+	dctM	SO3136	0.66	-1.2
3,265,685	-	dctM	SO3136	0.66	+0.5
3,265,689	+	dctM	SO3136	0.66	-0.6
3,265,695	-	dctM	SO3136	0.67	+0.1
3,265,697	-	dctM	SO3136	0.67	+0.4
3,265,697	-	dctM	SO3136	0.67	-0.6