Strain Fitness in Shewanella oneidensis MR-1 around SO3093

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,216,116	-		SO3091	0.66	-0.8
3,216,250	+		SO3091	0.80	+1.9
3,216,258	-		SO3091	0.81	+2.2
3,216,273	+		SO3091	0.82	+2.1
3,216,293	-		SO3091	0.84	+1.8
3,216,297	+		SO3091	0.85	+0.2
3,216,328	-		SO3091	0.88	+1.9
3,216,369	+				+1.4
3,216,535	-				+1.6
3,216,551	+				+0.8
3,216,559	-				+1.3
3,216,966	+		SO3092	0.75	+1.9
3,216,972	+		SO3092	0.76	+1.9
3,217,096	-				+2.8
3,217,147	+				+1.3
3,217,247	+		SO3093	0.14	+1.9
3,217,286	-		SO3093	0.17	+1.2
3,217,286	-		SO3093	0.17	+2.3
3,217,386	-		SO3093	0.27	+2.1
3,217,437	+		SO3093	0.32	+1.9
3,217,437	+		SO3093	0.32	+0.9
3,217,445	-		SO3093	0.33	+1.0
3,217,445	-		SO3093	0.33	+0.6
3,217,457	-		SO3093	0.34	+1.4
3,217,480	+		SO3093	0.36	+1.1
3,217,480	+		SO3093	0.36	+1.3
3,217,488	-		SO3093	0.37	+1.8
3,217,488	-		SO3093	0.37	+2.0
3,217,488	-		SO3093	0.37	+1.9
3,217,552	-		SO3093	0.44	+2.4
3,217,557	-		SO3093	0.44	+1.0
3,217,557	-		SO3093	0.44	+1.1
3,217,583	+		SO3093	0.47	+1.7
3,217,778	+		SO3093	0.66	+1.2
3,217,835	-		SO3093	0.71	+0.8
3,218,010	-		SO3093	0.89	+0.9
3,218,018	-		SO3093	0.89	+1.8
3,218,211	+				+1.5
3,218,229	+				+1.5
3,218,386	+		SO3094	0.13	+2.2
3,218,386	+		SO3094	0.13	+2.2
3,218,386	+		SO3094	0.13	-0.3
3,218,394	-		SO3094	0.13	+1.3
3,218,394	-		SO3094	0.13	+1.7
3,218,409	+		SO3094	0.14	+2.2
3,218,461	-		SO3094	0.16	+1.9
3,218,503	-		SO3094	0.19	+0.5
3,218,503	-		SO3094	0.19	+0.5
3,218,618	-		SO3094	0.24	+2.0
3,218,644	+		SO3094	0.25	+0.8
3,218,644	+		SO3094	0.25	+2.3
3,218,644	+		SO3094	0.25	+0.7
3,218,725	-		SO3094	0.29	+0.1
3,218,843	+		SO3094	0.35	+1.6
3,218,843	+		SO3094	0.35	+1.1
3,218,910	+		SO3094	0.38	+2.3
3,218,918	-		SO3094	0.39	+1.1
3,219,072	+		SO3094	0.46	+1.5