Strain Fitness in Shewanella oneidensis MR-1 around SO2984

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,109,669	+		SO2981	0.86	+0.2
3,109,702	-				+0.5
3,109,750	+				-1.4
3,109,808	+		SO2982	0.13	+0.5
3,109,808	+		SO2982	0.13	+0.7
3,109,843	+		SO2982	0.20	-0.5
3,109,910	-		SO2982	0.33	-3.5
3,109,910	-		SO2982	0.33	+0.5
3,109,949	-		SO2982	0.41	+0.5
3,109,950	-		SO2982	0.41	-1.2
3,109,961	+		SO2982	0.43	+1.8
3,110,003	+		SO2982	0.51	-2.0
3,110,045	-		SO2982	0.59	-1.7
3,110,098	+		SO2982	0.69	-0.2
3,110,103	+		SO2982	0.70	+0.8
3,110,113	+		SO2982	0.72	-0.4
3,110,113	+		SO2982	0.72	+0.5
3,110,113	+		SO2982	0.72	+0.9
3,110,113	+		SO2982	0.72	+0.1
3,110,116	-		SO2982	0.73	+2.2
3,110,121	-		SO2982	0.74	+0.5
3,110,121	-		SO2982	0.74	+0.1
3,110,121	-		SO2982	0.74	-0.1
3,110,121	-		SO2982	0.74	-2.5
3,110,121	-		SO2982	0.74	+1.0
3,110,141	+		SO2982	0.78	+1.9
3,110,168	-		SO2982	0.83	+0.5
3,110,173	+		SO2982	0.84	-0.5
3,110,173	+		SO2982	0.84	+1.9
3,110,181	-		SO2982	0.85	+2.4
3,110,216	-				-0.2
3,110,273	-				-0.7
3,110,273	-				-2.2
3,110,332	+		SO2983	0.20	-1.7
3,110,340	-		SO2983	0.22	+0.3
3,110,387	-		SO2983	0.34	-1.1
3,110,468	+		SO2983	0.55	-0.6
3,110,475	+		SO2983	0.57	-0.2
3,110,483	-		SO2983	0.59	-3.5
3,110,574	+		SO2983	0.82	-1.2
3,110,859	-		SO2984	0.41	-0.2
3,110,882	-		SO2984	0.45	-1.2
3,110,961	-		SO2984	0.59	-3.0
3,110,972	-		SO2984	0.61	-0.5
3,110,983	+		SO2984	0.63	+0.2
3,110,983	+		SO2984	0.63	+1.7
3,110,985	-		SO2984	0.64	-0.6
3,111,242	-				-3.3
3,111,274	+	O	SO2985	0.11	-0.1
3,111,285	+	O	SO2985	0.12	-1.2
3,111,401	-	O	SO2985	0.24	-1.9
3,111,478	+	O	SO2985	0.31	+1.2
3,111,487	+	O	SO2985	0.32	-0.8
3,111,509	-	O	SO2985	0.34	-2.4
3,111,598	-	O	SO2985	0.43	+0.1
3,111,598	-	O	SO2985	0.43	+0.3
3,111,629	+	O	SO2985	0.46	-0.8
3,111,979	-	O	SO2985	0.81	+0.8
3,112,047	+	O	SO2985	0.87	-0.4
3,112,118	+				-0.0